RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SLC15A1P46059 708 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 SLAMF1Q13291 335 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 SLC34A3Q8N130 599 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 TMEM132CQ8N3T6 1108 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 NKAPQ8N5F7 415 aaKnown RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 C2orf73Q8N5S3 287 aaPredicted RBP13.83□□□□□ -0.2
PABPC1-201ENST00000318607 OR9Q2Q8NGE9 314 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 RHBDF1Q96CC6 855 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 TINF2Q9BSI4 451 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 AP5M1Q9H0R1 490 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 SLC52A3Q9NQ40 469 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 ZIM2Q9NZV7 527 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 MED16Q9Y2X0 877 aa13.83□□□□□ -0.2
PABPC1-201ENST00000318607 DNAH14Q0VDD8 3507 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 A0A1B0GVC2 190 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 OR6C70A6NIJ9 312 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 A6NIN4 97 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 H3BN98 237 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 GABRDO14764 452 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 SCO1O75880 301 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 ATAD3CQ5T2N8 411 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 FAM171A1Q5VUB5 890 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 SYT12Q8IV01 421 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 ADGRG2Q8IZP9 1017 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 CYP4Z2PQ8N1L4 340 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 MTERF3Q96E29 417 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 MED8Q96G25 268 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 RTP3Q9BQQ7 232 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 ITPAQ9BY32 194 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 HOXD1Q9GZZ0 328 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 CD84Q9UIB8 345 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 AGO1Q9UL18 857 aaKnown RBP13.82□□□□□ -0.2
PABPC1-201ENST00000318607 GABRQQ9UN88 632 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 ALPK2Q86TB3 2170 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 ARID2Q68CP9 1835 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 GNG14A0A1W2PPG7 69 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 C17orf102A2RUQ5 167 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 AGAP5A6NIR3 686 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 TMCC2O75069 709 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 FABP3P05413 133 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 RPS17P08708 135 aaKnown RBP13.82□□□□□ -0.2
PABPC1-201ENST00000318607 SOAT1P35610 550 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 SPIBQ01892 262 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 ALDH6A1Q02252 535 aaKnown RBP13.82□□□□□ -0.2
PABPC1-201ENST00000318607 CAMK2GQ13555 558 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-201ENST00000318607 CPZQ66K79 652 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 MSRB3Q8IXL7 192 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 TAGAPQ8N103 731 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 LKAAEAR1Q8TD35 194 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 FOXJ1Q92949 421 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 ITPKCQ96DU7 683 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 PRDM5Q9NQX1 630 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-201ENST00000318607 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-201ENST00000318607 IFT52Q9Y366 437 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 PCDHGB6Q9Y5F9 930 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 PCM1Q15154 2024 aa13.82□□□□□ -0.2
PABPC1-201ENST00000318607 TRIP12Q14669 1992 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-201ENST00000318607 K7ERQ8 282 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 CLIC1O00299 241 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 FPGTO14772 594 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 NDST3O95803 873 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 OTCP00480 354 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 LPOP22079 712 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-201ENST00000318607 CA5AP35218 305 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 PSEN2P49810 448 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 CSRP3P50461 194 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 GBX1Q14549 363 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 SETMARQ53H47 684 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-201ENST00000318607 AGMOQ6ZNB7 445 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 LRRC49Q8IUZ0 686 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 CARNMT1Q8N4J0 409 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 NPLOC4Q8TAT6 608 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 CD200R1Q8TD46 325 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 YME1L1Q96TA2 773 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 DERL2Q9GZP9 239 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 ACSL6Q9UKU0 697 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 ZFP37Q9Y6Q3 630 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-201ENST00000318607 J3KTA2 159 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 GFRA2O00451 464 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 OR7A17O14581 309 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 AP2A2O94973 939 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 FGF1P05230 155 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 EPB42P16452 691 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 JUNBP17275 347 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-201ENST00000318607 RPL17P18621 184 aaKnown RBP13.81□□□□□ -0.2
PABPC1-201ENST00000318607 AIF1P55008 147 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 TOP3AQ13472 1001 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-201ENST00000318607 DUSP28Q4G0W2 176 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 ASCC1Q8N9N2 400 aaKnown RBP13.81□□□□□ -0.2
PABPC1-201ENST00000318607 OR4K1Q8NGD4 311 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 LILRB4Q8NHJ6 448 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 ZNF675Q8TD23 568 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 SH3KBP1Q96B97 665 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 PHOX2BQ99453 314 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 THG1LQ9NWX6 298 aaKnown RBP13.81□□□□□ -0.2
PABPC1-201ENST00000318607 UBA2Q9UBT2 640 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-201ENST00000318607 CLEC4AQ9UMR7 237 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 B3GNT3Q9Y2A9 372 aa13.81□□□□□ -0.2
PABPC1-201ENST00000318607 CCL15-CCL14A0A0B4J2E2 113 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms