RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 FERD3LQ96RJ6 166 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 GPATCH1Q9BRR8 931 aaKnown RBP16.18■□□□□ 0.18
CLCF1-201ENST00000312438 HAUS8Q9BT25 410 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 BRF2Q9HAW0 419 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 FGF22Q9HCT0 170 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 SPATA7Q9P0W8 599 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 TMEM181Q9P2C4 612 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 VPS29Q9UBQ0 182 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 BCAP29Q9UHQ4 241 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 PACSIN3Q9UKS6 424 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 L3MBTL1Q9Y468 752 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 HS3ST3A1Q9Y663 406 aa16.18■□□□□ 0.18
CLCF1-201ENST00000312438 TNRC18O15417 2968 aaPredicted RBP16.18■□□□□ 0.18
CLCF1-201ENST00000312438 H0Y3Z8 333 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 TRIM38O00635 465 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 FKBP6O75344 327 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 KRT36O76013 467 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 BCKDHAP12694 445 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 VARSP26640 1264 aaKnown RBP16.17■□□□□ 0.18
CLCF1-201ENST00000312438 YPEL5P62699 121 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 LAPTM5Q13571 262 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 CYP2A13Q16696 494 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 HIST2H2ACQ16777 129 aaPredicted RBP16.17■□□□□ 0.18
CLCF1-201ENST00000312438 TMEM31Q5JXX7 168 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 HIST2H2AA3Q6FI13 130 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 AAGABQ6PD74 315 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 NXPE4Q6UWF7 544 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 TMPRSS11BQ86T26 416 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 RAB42Q8N4Z0 105 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 OR7G3Q8NG95 312 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 SLC5A11Q8WWX8 675 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 LRRC58Q96CX6 371 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 WDR92Q96MX6 357 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 IL17FQ96PD4 163 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 DPY30Q9C005 99 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 CARS2Q9HA77 564 aaKnown RBP16.17■□□□□ 0.18
CLCF1-201ENST00000312438 SPATA6Q9NWH7 488 aaPredicted RBP16.17■□□□□ 0.18
CLCF1-201ENST00000312438 CA14Q9ULX7 337 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 PLAGL1Q9UM63 463 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 PLEKHM1Q9Y4G2 1056 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 ATG2BQ96BY7 2078 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 C10orf142B7Z368 130 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 TOR1BO14657 336 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 TNFRSF10CO14798 259 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 IL9P15248 144 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 AMD1P17707 334 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 OXTRP30559 389 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 FOXM1Q08050 763 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 PTGR1Q14914 329 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 RCN1Q15293 331 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 UAP1L1Q3KQV9 507 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 SAMD4BQ5PRF9 694 aaKnown RBP16.17■□□□□ 0.18
CLCF1-201ENST00000312438 PRAMEF14Q5SWL7 426 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 CATSPEREQ5SY80 951 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 PRAMEF13Q5VWM6 474 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 APIPQ96GX9 242 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 SLC45A3Q96JT2 553 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 OR2M4Q96R27 311 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 MTERF1Q99551 399 aaKnown RBP16.17■□□□□ 0.18
CLCF1-201ENST00000312438 PCBD2Q9H0N5 130 aa16.17■□□□□ 0.18
CLCF1-201ENST00000312438 STX18Q9P2W9 335 aaKnown RBP16.17■□□□□ 0.18
CLCF1-201ENST00000312438 UNC80Q8N2C7 3258 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 H0Y8X5 98 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 IL6P05231 212 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 CCR5P51681 352 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 CLDN8P56748 225 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 AP2B1P63010 937 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 CTBSQ01459 385 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 NFYCQ13952 458 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 CLCA4Q14CN2 919 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 Q7L0L9 218 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 LPCAT2Q7L5N7 544 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 RNF148Q8N7C7 305 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 LMNTD1Q8N9Z9 388 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 SMPDL3AQ92484 453 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 MENTQ9BUN1 341 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 IL1RL2Q9HB29 575 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 CD300AQ9UGN4 299 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 CA5BQ9Y2D0 317 aa16.16■□□□□ 0.18
CLCF1-201ENST00000312438 ASPDHA6ND91 283 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 PCNAP12004 261 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 XRCC1P18887 633 aaPredicted RBP16.15■□□□□ 0.18
CLCF1-201ENST00000312438 MLLT1Q03111 559 aaPredicted RBP16.15■□□□□ 0.18
CLCF1-201ENST00000312438 TFF2Q03403 129 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 DDX39BQ13838 428 aaKnown RBP16.15■□□□□ 0.18
CLCF1-201ENST00000312438 CCNIQ14094 377 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 TRIM25Q14258 630 aaKnown RBP16.15■□□□□ 0.18
CLCF1-201ENST00000312438 SLBPQ14493 270 aaKnown RBP eCLIP16.15■□□□□ 0.18
CLCF1-201ENST00000312438 KRT33BQ14525 404 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 TIGD2Q4W5G0 525 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 PAGE3Q5JUK9 113 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 ANO7Q6IWH7 933 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 LAS2Q8IYD9 372 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 DPP10Q8N608 796 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 OR1E3Q8WZA6 343 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 UBE2E3Q969T4 207 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 SH3KBP1Q96B97 665 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 SHDQ96IW2 340 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 MVB12BQ9H7P6 319 aa16.15■□□□□ 0.18
CLCF1-201ENST00000312438 SPTBN5Q9NRC6 3674 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms