RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ENDOVQ8N8Q3 282 aaKnown RBP13.38□□□□□ -0.27
CLCN6-201ENST00000312413 OR2AJ1Q8NGZ0 328 aa13.38□□□□□ -0.27
CLCN6-201ENST00000312413 AKAP1Q92667 903 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■□□□ 12.1
CLCN6-201ENST00000312413 DPF3Q92784 378 aa13.38□□□□□ -0.27
CLCN6-201ENST00000312413 TMED9Q9BVK6 235 aa13.38□□□□□ -0.27
CLCN6-201ENST00000312413 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
CLCN6-201ENST00000312413 ZNF700Q9H0M5 742 aa13.38□□□□□ -0.27
CLCN6-201ENST00000312413 RPF2Q9H7B2 306 aaKnown RBP13.38□□□□□ -0.27
CLCN6-201ENST00000312413 ZBTB26Q9HCK0 441 aa13.38□□□□□ -0.27
CLCN6-201ENST00000312413 VPS29Q9UBQ0 182 aa13.38□□□□□ -0.27
CLCN6-201ENST00000312413 ZDHHC2Q9UIJ5 367 aa13.38□□□□□ -0.27
CLCN6-201ENST00000312413 NEURL4Q96JN8 1562 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 LRRC72A6NJI9 287 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 CXorf49A8MYA2 514 aaPredicted RBP13.37□□□□□ -0.27
CLCN6-201ENST00000312413 MINDY4Q4G0A6 757 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 SLC8B1Q6J4K2 584 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 CHST9Q7L1S5 443 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 GALNT7Q86SF2 657 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 PHTF2Q8N3S3 785 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 GPR151Q8TDV0 419 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 PCED1BQ96HM7 432 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 FAXDC2Q96IV6 333 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 ACBD6Q9BR61 282 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 HCN2Q9UL51 889 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 RPS3P23396 243 aaKnown RBP eCLIP13.37□□□□□ -0.27
CLCN6-201ENST00000312413 CHRNA4P43681 627 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 CLCN7P51798 805 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 ZNF267Q14586 743 aaPredicted RBP13.37□□□□□ -0.27
CLCN6-201ENST00000312413 UBXN11Q5T124 520 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 NCEH1Q6PIU2 408 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 PTF1AQ7RTS3 328 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 ZCCHC10Q8TBK6 192 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 METTL21AQ8WXB1 218 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 ASB12Q8WXK4 309 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 CREB3L1Q96BA8 519 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 FBXL20Q96IG2 436 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 ZNF471Q9BX82 626 aaPredicted RBP13.37□□□□□ -0.27
CLCN6-201ENST00000312413 EMC3Q9P0I2 261 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 FCF1Q9Y324 198 aaKnown RBP13.37□□□□□ -0.27
CLCN6-201ENST00000312413 TCRBV7S3A2A0A539 114 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 SLITRK5O94991 958 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 RAB36O95755 333 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 OPN1SWP03999 348 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 ZNF20P17024 532 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 EDNRAP25101 427 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 CTNNB1P35222 781 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 DGKQP52824 942 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 C1QTNF8P60827 252 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 EVX2Q03828 476 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 SH3D19Q5HYK7 790 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 SNAP47Q5SQN1 464 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 TMEM110Q86TL2 294 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 LCN9Q8WX39 176 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 BIRC7Q96CA5 298 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 PYURFQ96I23 114 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 HIST1H2AAQ96QV6 131 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 NDC1Q9BTX1 674 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 UCK2Q9BZX2 261 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 MMP27Q9H306 513 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 TRBC2A0A5B9 178 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 M0R233 179 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 GPR25O00155 361 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 SEPT4O43236 478 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 DLX3O60479 287 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 FGF19O95750 216 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 SNHG28P0DPA3 235 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 NDUFV1P49821 464 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 NCBP2P52298 156 aaKnown RBP eCLIP13.37□□□□□ -0.272e-8■■□□□ 13.6
CLCN6-201ENST00000312413 ZNF45Q02386 682 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 ATAT1Q5SQI0 421 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 SNX29P2Q8IUI4 249 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 CMTR2Q8IYT2 770 aaKnown RBP13.37□□□□□ -0.27
CLCN6-201ENST00000312413 CERS5Q8N5B7 392 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 NATD1Q8N6N6 113 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 ASCC1Q8N9N2 400 aaKnown RBP13.37□□□□□ -0.27
CLCN6-201ENST00000312413 OR5J2Q8NH18 312 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 PKP4Q99569 1192 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 P2RX2Q9UBL9 471 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 ARL5AQ9Y689 179 aa13.37□□□□□ -0.27
CLCN6-201ENST00000312413 TRBV23OR9-2A0A075B6M9 112 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 SH3D21A4FU49 640 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 TMEM233B4DJY2 109 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 ECI2O75521 394 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 ZNF182P17025 639 aaPredicted RBP13.36□□□□□ -0.27
CLCN6-201ENST00000312413 VAMP1P23763 118 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 GNG2P59768 71 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 MAP2K5Q13163 448 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 VMACQ2NL98 169 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 BTBD16Q32M84 506 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 SLC2A7Q6PXP3 512 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 MBOAT1Q6ZNC8 495 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 GAL3ST4Q96RP7 486 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 HTATIP2Q9BUP3 242 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 MOCS1Q9NZB8 636 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 SEC14L4Q9UDX3 406 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 GTF2IRD1Q9UHL9 959 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 COL3A1P02461 1466 aaPredicted RBP13.36□□□□□ -0.27
CLCN6-201ENST00000312413 A0A1W2PP18 115 aa13.36□□□□□ -0.27
CLCN6-201ENST00000312413 AURKAO14965 403 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms