RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 DNAH14Q0VDD8 3507 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 A0A1W2PPV9 198 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 LSM1O15116 133 aaKnown RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 UBDO15205 165 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 PEX11AO75192 247 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 PDYNP01213 254 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 TNFP01375 233 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 RPN2P04844 631 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 MTHFD1P11586 935 aaKnown RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 JUPP14923 745 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 NPPBP16860 134 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 VARSP26640 1264 aaKnown RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 PIK3R1P27986 724 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 ACTR1BP42025 376 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 HALP42357 657 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 ACTR1AP61163 376 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 KCNJ2P63252 427 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 YBX1P67809 324 aaKnown RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 PCDH1Q08174 1060 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 TSTA3Q13630 321 aaPredicted RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 LRP8Q14114 963 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 DOC2AQ14183 400 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 E2F2Q14209 437 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 PTK2BQ14289 1009 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 ZRSR2Q15696 482 aaKnown RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 TBCCQ15814 346 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 CYP2A13Q16696 494 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 XKR6Q5GH73 641 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 CATSPEREQ5SY80 951 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 ABRAXAS1Q6UWZ7 409 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 WASH2PQ6VEQ5 465 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 MAMSTRQ6ZN01 415 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 RNF165Q6ZSG1 346 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 RNF175Q8N4F7 328 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 CHCHD4Q8N4Q1 142 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 LINC01555Q8NAE3 123 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 FBXO27Q8NI29 283 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 C1orf216Q8TAB5 229 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 GPBAR1Q8TDU6 330 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 MTFMTQ96DP5 389 aaKnown RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 KLHDC7BQ96G42 594 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 HSPA12BQ96MM6 686 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 IER2Q9BTL4 223 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 XKR8Q9H6D3 395 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 WASH6PQ9NQA3 447 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 CCDC177Q9NQR7 707 aaPredicted RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 TRNAU1APQ9NX07 287 aaKnown RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 SPATA7Q9P0W8 599 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 TAGLN3Q9UI15 199 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 LNPEPQ9UIQ6 1025 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 PCOLCE2Q9UKZ9 415 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 ZNF490Q9ULM2 529 aaPredicted RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 TDRD6O60522 2096 aaKnown RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 ARHGEF17Q96PE2 2063 aaPredicted RBP6.73□□□□□ -1.33
PTCD2-201ENST00000308077 CACNA1IQ9P0X4 2223 aa6.73□□□□□ -1.33
PTCD2-201ENST00000308077 TNRC6BQ9UPQ9 1833 aaKnown RBP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 MEI4A8MW99 385 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 UGDHO60701 494 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 VPS4BO75351 444 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ULK1O75385 1050 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 DNAJC8O75937 253 aaPredicted RBP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ATP5HO75947 161 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ESRRAP11474 423 aaPredicted RBP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 TDGF1P13385 188 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 LBPP18428 481 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 CALB2P22676 271 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PSMB5P28074 263 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PKLRP30613 574 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 CASP2P42575 452 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 NEK2P51955 445 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 HMGCS1Q01581 520 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 IRF8Q02556 426 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ARHGAP19Q14CB8 494 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 USP39Q53GS9 565 aaKnown RBP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SGO1Q5FBB7 561 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 C6orf136Q5SQH8 315 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PRAMEF14Q5SWL7 426 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PRAMEF13Q5VWM6 474 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 LIPJQ5W064 366 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 GRHL2Q6ISB3 625 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 OGFOD2Q6N063 350 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 LCTLQ6UWM7 567 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 UNQ6494/PRO21346Q6UXR6 183 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SLCO4C1Q6ZQN7 724 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 RINLQ6ZS11 566 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 TRIM46Q7Z4K8 759 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 TMPRSS11BQ86T26 416 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SFTPA2Q8IWL1 248 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 RGL4Q8IZJ4 473 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 OR52E1Q8NGJ3 308 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 WDR20Q8TBZ3 569 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 JPH3Q8WXH2 748 aaPredicted RBP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SLC45A3Q96JT2 553 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SPACA7Q96KW9 195 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 MIPEPQ99797 713 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 CCT7Q99832 543 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ACPTQ9BZG2 426 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SPNS1Q9H2V7 528 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 CLMPQ9H6B4 373 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms