RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 KLF15Q9UIH9 416 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 KNL1Q8NG31 2342 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 LOC100653049A0A140TA62 436 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 A6NCN8 305 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 OR5K4A6NMS3 321 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 PSMD12O00232 456 aaPredicted RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 LAMTOR5O43504 91 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 KRT34O76011 436 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 EML2O95834 649 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 WNT1P04628 370 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 JUNDP17535 347 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 CD22P20273 847 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 PKLRP30613 574 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 EMX2Q04743 252 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 MAD2L1Q13257 205 aaPredicted RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 HERC3Q15034 1050 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 HIST2H2ACQ16777 129 aaPredicted RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 AP5B1Q2VPB7 878 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 C10orf62Q5T681 223 aaPredicted RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 HIST2H2AA3Q6FI13 130 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 NXPE4Q6UWF7 544 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 TAF8Q7Z7C8 310 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 C17orf64Q86WR6 236 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 DNASE2BQ8WZ79 361 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 TCEAL2Q9H3H9 227 aaPredicted RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 PRMT8Q9NR22 394 aaPredicted RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 TAAR2Q9P1P5 351 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 ZNF624Q9P2J8 865 aaPredicted RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 APOBEC3BQ9UH17 382 aaKnown RBP16.94■□□□□ 0.3
KRT28-201ENST00000306658 CCL27Q9Y4X3 112 aa16.94■□□□□ 0.3
KRT28-201ENST00000306658 EML5Q05BV3 1969 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 NCOR1O75376 2440 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 CFAP73A6NFT4 308 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 B2RBV5 119 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 SLC2A4P14672 509 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 ACADVLP49748 655 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 GRIK2Q13002 908 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 CYLC2Q14093 348 aaPredicted RBP16.93■□□□□ 0.3
KRT28-201ENST00000306658 MAPRE2Q15555 327 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 CATSPEREQ5SY80 951 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 MED27Q6P2C8 311 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 IYDQ6PHW0 289 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 TSSK4Q6SA08 328 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 MIER2Q8N344 545 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 POU5F2Q8N7G0 328 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 C1orf216Q8TAB5 229 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 WDR20Q8TBZ3 569 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 BTBD10Q9BSF8 475 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 TAC3Q9UHF0 121 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 FANCMQ8IYD8 2048 aa16.93■□□□□ 0.3
KRT28-201ENST00000306658 ARHGEF17Q96PE2 2063 aaPredicted RBP16.92■□□□□ 0.3
KRT28-201ENST00000306658 GYG2O15488 501 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 CSF2P04141 144 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 VARSP26640 1264 aaKnown RBP16.92■□□□□ 0.3
KRT28-201ENST00000306658 SHMT2P34897 504 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 SLC19A1P41440 591 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 CPA2P48052 419 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 FNTBP49356 437 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 NEK2P51955 445 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 MXRA7P84157 204 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 CSTF3Q12996 717 aaKnown RBP16.92■□□□□ 0.3
KRT28-201ENST00000306658 PRRT3Q5FWE3 981 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 WDR5BQ86VZ2 330 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 TRIM48Q8IWZ4 208 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 LINC01555Q8NAE3 123 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 ZFPM2Q8WW38 1151 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 LCN9Q8WX39 176 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 UBE2E3Q969T4 207 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 ACAT2Q9BWD1 397 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 ACPTQ9BZG2 426 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 XKR8Q9H6D3 395 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 SDR39U1Q9NRG7 319 aaPredicted RBP16.92■□□□□ 0.3
KRT28-201ENST00000306658 AIG1Q9NVV5 245 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 C1orf109Q9NX04 203 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 NOP53Q9NZM5 478 aaKnown RBP16.92■□□□□ 0.3
KRT28-201ENST00000306658 TECTAO75443 2155 aa16.92■□□□□ 0.3
KRT28-201ENST00000306658 KIR2DS5A0A0G2JLQ3 304 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 A0A0G2JNG1 304 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 KIR2DS3K7RE56 304 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 SEC22BO75396 215 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 RSL1D1O76021 490 aaKnown RBP16.91■□□□□ 0.3
KRT28-201ENST00000306658 HSD3B1P14060 373 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 NME1P15531 152 aaKnown RBP16.91■□□□□ 0.3
KRT28-201ENST00000306658 XRCC1P18887 633 aaPredicted RBP16.91■□□□□ 0.3
KRT28-201ENST00000306658 HSD3B2P26439 372 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 MRPL19P49406 292 aaKnown RBP16.91■□□□□ 0.3
KRT28-201ENST00000306658 HMGCS1Q01581 520 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 KIR2DS5Q14953 304 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 ELOCQ15369 112 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 AGKQ53H12 422 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 C11orf74Q86VG3 221 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 PARP9Q8IXQ6 854 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 KRT78Q8N1N4 520 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 OR7G3Q8NG95 312 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 C1orf21Q9H246 121 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 PELI2Q9HAT8 420 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 BRF2Q9HAW0 419 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 LRTM1Q9HBL6 345 aa16.91■□□□□ 0.3
KRT28-201ENST00000306658 GEMIN8Q9NWZ8 242 aaKnown RBP16.91■□□□□ 0.3
KRT28-201ENST00000306658 TAS2R1Q9NYW7 299 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms