RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 FUOMA2VDF0 154 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 ADAM12O43184 909 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 HSD17B1P14061 328 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 POLR2LP62875 67 aaKnown RBP12.95□□□□□ -0.34
CASC4-201ENST00000299957 FNDC3BQ53EP0 1204 aaKnown RBP12.95□□□□□ -0.34
CASC4-201ENST00000299957 KLHL12Q53G59 568 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 ALKAL1Q6UXT8 129 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 SNX20Q7Z614 316 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 CARM1Q86X55 608 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 APCDD1Q8J025 514 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 TRIB2Q92519 343 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 NT5C3BQ969T7 300 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 DIRAS2Q96HU8 199 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 DNAJC27Q9NZQ0 273 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 GPC6Q9Y625 555 aaPredicted RBP12.95□□□□□ -0.34
CASC4-201ENST00000299957 DOCK5Q9H7D0 1870 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 MBLAC1A4D2B0 266 aaPredicted RBP12.95□□□□□ -0.34
CASC4-201ENST00000299957 GLOD5A6NK44 160 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 SLC1A7O00341 560 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 PPP2R1BP30154 601 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 NSG1P42857 185 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 IL18R1Q13478 541 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 SPCS2Q15005 226 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 RFLNAQ6ZTI6 216 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 CYP4Z1Q86W10 505 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 ZFAND4Q86XD8 727 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 KBTBD8Q8NFY9 601 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 CD200R1Q8TD46 325 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 Q96MT0 163 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 IMP3Q9NV31 184 aaKnown RBP12.95□□□□□ -0.34
CASC4-201ENST00000299957 ZNF624Q9P2J8 865 aaPredicted RBP12.95□□□□□ -0.34
CASC4-201ENST00000299957 COMMD3Q9UBI1 195 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 SEC14L3Q9UDX4 400 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 DLGAP4Q9Y2H0 992 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 TBC1D3BA6NDS4 549 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 CENPXA8MT69 81 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 STSP08842 583 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 NOS3P29474 1203 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 HNF1BP35680 557 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 CSNK2BP67870 215 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 RPP38P78345 283 aaKnown RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 SEMA3BQ13214 749 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 KANK2Q63ZY3 851 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 IGFN1Q86VF2 1251 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 MEX3DQ86XN8 651 aaKnown RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 MYEOVQ96EZ4 313 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 ZNF641Q96N77 438 aaPredicted RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 C11orf84Q9BUA3 381 aaPredicted RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 VPS29Q9UBQ0 182 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 YBX1P67809 324 aaKnown RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 ELP6Q0PNE2 266 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 NFATC2Q13469 925 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 TBC1D25Q3MII6 688 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 SERPINA13PQ6UXR4 307 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 KRT74Q7RTS7 529 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 C10orf53Q8N6V4 93 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 LGALS12Q96DT0 336 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 APIPQ96GX9 242 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 ZNF382Q96SR6 550 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 RIOK2Q9BVS4 552 aaKnown RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 TBC1D17Q9HA65 648 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 C5AR2Q9P296 337 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 DHRS7Q9Y394 339 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 A0A096LPI6 279 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 KLK1P06870 262 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 PFKLP17858 780 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 C21orf33P30042 268 aaPredicted RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 HTR7P34969 479 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 DCTP40126 519 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 GSTM5P46439 218 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 CENPAP49450 140 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 MLLT10P55197 1068 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 SP3Q02447 781 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 CYBRD1Q53TN4 286 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 CEP78Q5JTW2 689 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 TAS1R1Q7RTX1 841 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 RHEBL1Q8TAI7 183 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 TBX5Q99593 518 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 RTP3Q9BQQ7 232 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 CD244Q9BZW8 370 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 SLC32A1Q9H598 525 aa12.94□□□□□ -0.34
CASC4-201ENST00000299957 PTBP2Q9UKA9 531 aaKnown RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 WBP11Q9Y2W2 641 aaKnown RBP12.94□□□□□ -0.34
CASC4-201ENST00000299957 CPSF4LA6NMK7 179 aaKnown RBP12.93□□□□□ -0.34
CASC4-201ENST00000299957 HOXA2O43364 376 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 EEDO75530 441 aaKnown RBP12.93□□□□□ -0.34
CASC4-201ENST00000299957 PRAMEF12O95522 483 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 ATXN1LP0C7T5 689 aaKnown RBP12.93□□□□□ -0.34
CASC4-201ENST00000299957 PIGAP37287 484 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 TSTQ16762 297 aaKnown RBP12.93□□□□□ -0.34
CASC4-201ENST00000299957 TRIM40Q6P9F5 258 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 SVOPLQ8N434 492 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 NFKBIDQ8NI38 313 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 CD99L2Q8TCZ2 262 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 ZNF419Q96HQ0 510 aaPredicted RBP12.93□□□□□ -0.34
CASC4-201ENST00000299957 MUC13Q9H3R2 512 aa12.93□□□□□ -0.34
CASC4-201ENST00000299957 TMEM39AQ9NV64 488 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms