RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 LCP2Q13094 533 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 COL9A3Q14050 684 aaPredicted RBP6.94□□□□□ -1.3
RAG1-201ENST00000299440 STK11Q15831 433 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.94□□□□□ -1.3
RAG1-201ENST00000299440 TMEM225Q6GV28 225 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 FAM47BQ8NA70 645 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 SGCDQ92629 289 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 FRMD6Q96NE9 622 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 SIKE1Q9BRV8 207 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 PHF7Q9BWX1 381 aaPredicted RBP6.94□□□□□ -1.3
RAG1-201ENST00000299440 SCML1Q9UN30 329 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 CA5BQ9Y2D0 317 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 AGPSO00116 658 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 PRAMEF11O60813 436 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 CHRNGP07510 517 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 UROSP10746 265 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 P2RY2P41231 377 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 CBX5P45973 191 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 GABRB2P47870 512 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 PPP3R1P63098 170 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 UBAP2LQ14157 1087 aaKnown RBP6.94□□□□□ -1.3
RAG1-201ENST00000299440 CARD17Q5XLA6 110 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 FSTL5Q8N475 847 aaPredicted RBP6.94□□□□□ -1.3
RAG1-201ENST00000299440 OR2T34Q8NGX1 318 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 OR4C6Q8NH72 309 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 RORBQ92753 470 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 GLYATL1Q969I3 302 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 IL17FQ96PD4 163 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 DGCR6LQ9BY27 220 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 WDR55Q9H6Y2 383 aaPredicted RBP6.94□□□□□ -1.3
RAG1-201ENST00000299440 WBP1LQ9NX94 342 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 DUXAA6NLW8 204 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 TRIM24O15164 1050 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 TSC22D2O75157 780 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 CCNB2O95067 398 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 SHBGP04278 402 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 MYBPC3Q14896 1274 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 CXXC5Q7LFL8 322 aaKnown RBP6.94□□□□□ -1.3
RAG1-201ENST00000299440 ASPGQ86U10 573 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 ANKFN1Q8N957 763 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 DNAAF1Q8NEP3 725 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 SLC22A8Q8TCC7 542 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 IGSF8Q969P0 613 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 PEX11GQ96HA9 241 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 ULBP3Q9BZM4 244 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 SPAG4Q9NPE6 437 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 TIGARQ9NQ88 270 aa6.94□□□□□ -1.3
RAG1-201ENST00000299440 PGLSO95336 258 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 AHSA1O95433 338 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 GSRP00390 522 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 FAM163BP0C2L3 166 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 RANBP1P43487 201 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 CRISP3P54108 245 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 ITGA1P56199 1179 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 SRP54P61011 504 aaKnown RBP6.93□□□□□ -1.3
RAG1-201ENST00000299440 PPP2R2BQ00005 443 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 PPIDQ08752 370 aaKnown RBP6.93□□□□□ -1.3
RAG1-201ENST00000299440 RASGEF1BQ0VAM2 473 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 BNIP1Q12981 228 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 SERINC3Q13530 473 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 DPYSL2Q16555 572 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 DCST1Q5T197 706 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 ARMC3Q5W041 872 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 TMIGD1Q6UXZ0 262 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 GK5Q6ZS86 529 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 GPRIN1Q7Z2K8 1008 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 PRICKLE2Q7Z3G6 844 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 TCEAL8Q8IYN2 117 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 C1orf52Q8N6N3 182 aaKnown RBP6.93□□□□□ -1.3
RAG1-201ENST00000299440 BHLHE41Q9C0J9 482 aaPredicted RBP6.93□□□□□ -1.3
RAG1-201ENST00000299440 MAFFQ9ULX9 164 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 SORCS3Q9UPU3 1222 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 PEAK1Q9H792 1746 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 TTLL8A6PVC2 850 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 MAGEB17A8MXT2 336 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 ADAMTS3O15072 1205 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 KHDRBS3O75525 346 aaKnown RBP6.93□□□□□ -1.3
RAG1-201ENST00000299440 BEST1O76090 585 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 TCN2P20062 427 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 PTNP21246 168 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 PCYT1AP49585 367 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 NOVA1P51513 510 aaKnown RBP6.93□□□□□ -1.3
RAG1-201ENST00000299440 GALK2Q01415 458 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 TERF2Q15554 542 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 NRF1Q16656 503 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 C9orf50Q5SZB4 431 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 NCBP2-AS2Q69YL0 99 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 AGTRAPQ6RW13 159 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 RNF111Q6ZNA4 994 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 SPATA19Q7Z5L4 167 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 DHRSXQ8N5I4 330 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 CHST14Q8NCH0 376 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 SLC35F5Q8WV83 523 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 DAZLQ92904 295 aaKnown RBP6.93□□□□□ -1.3
RAG1-201ENST00000299440 RCN3Q96D15 328 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 LRIG1Q96JA1 1093 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 LPAR4Q99677 370 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 HERPUD2Q9BSE4 406 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 C9orf16Q9BUW7 83 aa6.93□□□□□ -1.3
RAG1-201ENST00000299440 DUSP26Q9BV47 211 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms