RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 ARAP3Q8WWN8 1544 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 IRF4Q15306 451 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CRTC2Q53ET0 693 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 NEPROQ6NW34 567 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CYP20A1Q6UW02 462 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 PRSS48Q7RTY5 328 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ATG9AQ7Z3C6 839 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 PXKQ7Z7A4 578 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TSPYL5Q86VY4 417 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TTLQ8NG68 377 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 SELENOMQ8WWX9 145 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 HSPBAP1Q96EW2 488 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ALPK1Q96QP1 1244 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 GPER1Q99527 375 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 DUSP16Q9BY84 665 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 EBF3Q9H4W6 596 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 FBXO6Q9NRD1 293 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 EVA1BQ9NVM1 165 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TAF1LQ8IZX4 1826 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 K7ERU9 68 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TREHO43280 583 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 SEC14L5O43304 696 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 NR2F1P10589 423 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MLLT3P42568 568 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 DGKGP49619 791 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 SGO1Q5FBB7 561 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CBWD3Q5JTY5 395 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CBWD5Q5RIA9 395 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 VWA5B2Q8N398 1253 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MFSD9Q8NBP5 474 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 OR56B4Q8NH76 319 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 DHRS9Q9BPW9 319 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CCDC3Q9BQI4 270 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ARL6Q9H0F7 186 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 THAP2Q9H0W7 228 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF395Q9H8N7 513 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 NEUROD4Q9HD90 331 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TMEM260Q9NX78 707 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 FBXL21Q9UKT6 434 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 OR7A17O14581 309 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MAGEB4O15481 346 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MT-ND5P03915 603 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ALAS1P13196 640 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MRPL19P49406 292 aaKnown RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CACNB1Q02641 598 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CREB5Q02930 508 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 DBPQ10586 325 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TMEM132BQ14DG7 1078 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 PON2Q15165 354 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 PPP1R3AQ16821 1122 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 XKR4Q5GH76 650 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TRAPPC3LQ5T215 181 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 C1orf216Q8TAB5 229 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 STON2Q8WXE9 905 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 B3GNT5Q9BYG0 378 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 LACRTQ9GZZ8 138 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MROH8Q9H579 483 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CXXC1Q9P0U4 656 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 PCDHB1Q9Y5F3 818 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 LCHNA4D1U4 455 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CDHR4A6H8M9 788 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 GLRA2P23416 452 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TKFCQ3LXA3 575 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 IL23RQ5VWK5 629 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 SYT12Q8IV01 421 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 OSCARQ8IYS5 282 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MS4A15Q8N5U1 240 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TIFAQ96CG3 184 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ZDHHC6Q9H6R6 413 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ZMYM5Q9UJ78 669 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 EXOSC1Q9Y3B2 195 aaKnown RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 DAGLAQ9Y4D2 1042 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 NALCNQ8IZF0 1738 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 GGT3PA6NGU5 568 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 POLRMTO00411 1230 aaKnown RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 HGFP14210 728 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 GGT2P36268 569 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CRISP1P54107 249 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 RPP30P78346 268 aaKnown RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 PFKFB4Q16877 469 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 HDAC10Q969S8 669 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MTMR8Q96EF0 704 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 POLR3FQ9H1D9 316 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MRM3Q9HC36 420 aaKnown RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 KCNIP2Q9NS61 270 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 NLE1Q9NVX2 485 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MON2Q7Z3U7 1717 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 DENND4CQ5VZ89 1909 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CNTNAP4Q9C0A0 1308 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 RLFQ13129 1914 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TAF1P21675 1872 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 LOC100130705A0A1B0GUX0 176 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 DUXAA6NLW8 204 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MT-ND1P03886 318 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 CCR1P32246 355 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 KCNC4Q03721 635 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 LAPTM4AQ15012 233 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 DUSP6Q16828 381 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms