RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ELK4P28324 431 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 DNAJA1P31689 397 aaKnown RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 VIPR1P32241 457 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ISL1P61371 349 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ZXDBP98169 803 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SPIDRQ14159 915 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ELOAQ14241 798 aaKnown RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 VMACQ2NL98 169 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 PTCHD3Q3KNS1 767 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ANXA8L1Q5VT79 327 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 OR2T5Q6IEZ7 315 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CAPN13Q6MZZ7 669 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 Q6ZNX1 250 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CYP2U1Q7Z449 544 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 DCP2Q8IU60 420 aaKnown RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ZDHHC21Q8IVQ6 265 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 PIK3C3Q8NEB9 887 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 OR2T29Q8NH02 315 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 TRUB1Q8WWH5 349 aaKnown RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 NODALQ96S42 347 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 TBCDQ9BTW9 1192 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ZSCAN5AQ9BUG6 496 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 RAD21L1Q9H4I0 556 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 PREBQ9HCU5 417 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SPATA6Q9NWH7 488 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 THG1LQ9NWX6 298 aaKnown RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 GPRC5BQ9NZH0 403 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 BTNL2Q9UIR0 455 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 LEFTY2O00292 366 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SLC1A7O00341 560 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 LILRB3O75022 631 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 LHCGRP22888 699 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 PTX3P26022 381 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SOX11P35716 441 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 RECQLP46063 649 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 PHC1P78364 1004 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CD47Q08722 323 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 PGS1Q32NB8 556 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 LDLRAP1Q5SW96 308 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 GRHL2Q6ISB3 625 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 GDPD4Q6W3E5 623 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 DNAJC14Q6Y2X3 702 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 GAREM2Q75VX8 874 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 GPR155Q7Z3F1 870 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ANKRD13BQ86YJ7 626 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SYT12Q8IV01 421 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SVOPQ8N4V2 548 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 TRAM1L1Q8N609 369 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 VPS37AQ8NEZ2 397 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 NETO1Q8TDF5 533 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SNX19Q92543 992 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 VOPP1Q96AW1 172 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 REPS1Q96D71 796 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 LRIG1Q96JA1 1093 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 VPS35Q96QK1 796 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 DCUN1D5Q9BTE7 237 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 RNF208Q9H0X6 261 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SOX17Q9H6I2 414 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SMURF2Q9HAU4 748 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 AASDHPPTQ9NRN7 309 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 FAIMQ9NVQ4 179 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 VPS29Q9UBQ0 182 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 B4GALT6Q9UBX8 382 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 PPT2Q9UMR5 302 aa9.72□□□□□ -0.85
TNFRSF11B-201ENST00000297350 A0A1W2PPW3 197 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 TEX28O15482 410 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 PSIP1O75475 530 aaKnown RBP9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 JRKO75564 520 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CLPXO76031 633 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CATP04040 527 aaKnown RBP9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 FABP3P05413 133 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 HPCAL1P37235 193 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ENTPD1P49961 510 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 IRF8Q02556 426 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 HSPA14Q0VDF9 509 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CHIT1Q13231 466 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 E2F2Q14209 437 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 C16orf72Q14CZ0 275 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SPIN4Q56A73 249 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ANKRD26P1Q6NSI1 321 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 CES5AQ6NT32 575 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 MBOAT1Q6ZNC8 495 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 EIF3MQ7L2H7 374 aaKnown RBP9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SMYD1Q8NB12 490 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 FBXO15Q8NCQ5 510 aaPredicted RBP9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 TSSK3Q96PN8 268 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 FAM83DQ9H4H8 585 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 ZDHHC6Q9H6R6 413 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SIRT5Q9NXA8 310 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 SCN3BQ9NY72 215 aa9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 TMEFF2Q9UIK5 374 aaPredicted RBP9.71□□□□□ -0.85
TNFRSF11B-201ENST00000297350 MAGEB17A8MXT2 336 aa9.71□□□□□ -0.86
TNFRSF11B-201ENST00000297350 CLIC1O00299 241 aa9.71□□□□□ -0.86
TNFRSF11B-201ENST00000297350 FPGTO14772 594 aa9.71□□□□□ -0.86
TNFRSF11B-201ENST00000297350 SLC22A1O15245 554 aa9.71□□□□□ -0.86
TNFRSF11B-201ENST00000297350 GKP32189 559 aa9.71□□□□□ -0.86
TNFRSF11B-201ENST00000297350 RPL3P39023 403 aaKnown RBP9.71□□□□□ -0.86
TNFRSF11B-201ENST00000297350 GALK1P51570 392 aa9.71□□□□□ -0.86
TNFRSF11B-201ENST00000297350 ITGA1P56199 1179 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms