RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 PGBD3Q8N328 593 aa15.05■□□□□ -0
LSM6-201ENST00000296581 WDR34Q96EX3 536 aa15.05■□□□□ -0
LSM6-201ENST00000296581 LRTM1Q9HBL6 345 aa15.05■□□□□ -0
LSM6-201ENST00000296581 WNT16Q9UBV4 365 aa15.05■□□□□ -0
LSM6-201ENST00000296581 PRSS38A1L453 326 aa15.04■□□□□ -0
LSM6-201ENST00000296581 H0YIV9 168 aa15.04■□□□□ -0
LSM6-201ENST00000296581 PFDN1O60925 122 aa15.04■□□□□ -0
LSM6-201ENST00000296581 RSL1D1O76021 490 aaKnown RBP15.04■□□□□ -0
LSM6-201ENST00000296581 APBB3O95704 486 aa15.04■□□□□ -0
LSM6-201ENST00000296581 SLC2A4P14672 509 aa15.04■□□□□ -0
LSM6-201ENST00000296581 PTDSS1P48651 473 aaKnown RBP15.04■□□□□ -0
LSM6-201ENST00000296581 CCR5P51681 352 aa15.04■□□□□ -0
LSM6-201ENST00000296581 STARD6P59095 220 aa15.04■□□□□ -0
LSM6-201ENST00000296581 GAS6Q14393 721 aa15.04■□□□□ -0
LSM6-201ENST00000296581 ARHGAP19Q14CB8 494 aa15.04■□□□□ -0
LSM6-201ENST00000296581 IMPG1Q17R60 797 aa15.04■□□□□ -0
LSM6-201ENST00000296581 MFSD4BQ5TF39 518 aa15.04■□□□□ -0
LSM6-201ENST00000296581 IL23RQ5VWK5 629 aa15.04■□□□□ -0
LSM6-201ENST00000296581 GCNT7Q6ZNI0 430 aa15.04■□□□□ -0
LSM6-201ENST00000296581 SLCO4C1Q6ZQN7 724 aa15.04■□□□□ -0
LSM6-201ENST00000296581 TBC1D21Q8IYX1 336 aa15.04■□□□□ -0
LSM6-201ENST00000296581 ENDOVQ8N8Q3 282 aaKnown RBP15.04■□□□□ -0
LSM6-201ENST00000296581 WDR20Q8TBZ3 569 aa15.04■□□□□ -0
LSM6-201ENST00000296581 WDR60Q8WVS4 1066 aa15.04■□□□□ -0
LSM6-201ENST00000296581 GBP5Q96PP8 586 aa15.04■□□□□ -0
LSM6-201ENST00000296581 TRIT1Q9H3H1 467 aaKnown RBP15.04■□□□□ -0
LSM6-201ENST00000296581 WDR41Q9HAD4 459 aa15.04■□□□□ -0
LSM6-201ENST00000296581 LTB4R2Q9NPC1 389 aa15.04■□□□□ -0
LSM6-201ENST00000296581 C2orf42Q9NWW7 574 aa15.04■□□□□ -0
LSM6-201ENST00000296581 C1orf109Q9NX04 203 aa15.04■□□□□ -0
LSM6-201ENST00000296581 KCNK6Q9Y257 313 aa15.04■□□□□ -0
LSM6-201ENST00000296581 CA5BQ9Y2D0 317 aa15.04■□□□□ -0
LSM6-201ENST00000296581 WDR37Q9Y2I8 494 aa15.04■□□□□ -0
LSM6-201ENST00000296581 PLEKHM1Q9Y4G2 1056 aa15.04■□□□□ -0
LSM6-201ENST00000296581 KRBA1A5PL33 1030 aa15.04■□□□□ -0
LSM6-201ENST00000296581 H0Y8X5 98 aa15.04■□□□□ -0
LSM6-201ENST00000296581 NR5A2O00482 541 aa15.04■□□□□ -0
LSM6-201ENST00000296581 ANKRD28O15084 1053 aa15.04■□□□□ -0
LSM6-201ENST00000296581 SLC22A3O75751 556 aa15.04■□□□□ -0
LSM6-201ENST00000296581 CAPN3P20807 821 aa15.04■□□□□ -0
LSM6-201ENST00000296581 RPL10P27635 214 aaKnown RBP15.04■□□□□ -0
LSM6-201ENST00000296581 AKT2P31751 481 aa15.04■□□□□ -0
LSM6-201ENST00000296581 HSD17B2P37059 387 aa15.04■□□□□ -0
LSM6-201ENST00000296581 NEK2P51955 445 aa15.04■□□□□ -0
LSM6-201ENST00000296581 MTTPP55157 894 aa15.04■□□□□ -0
LSM6-201ENST00000296581 UFM1P61960 85 aa15.04■□□□□ -0
LSM6-201ENST00000296581 RPL38P63173 70 aaKnown RBP15.04■□□□□ -0
LSM6-201ENST00000296581 RCAN2Q14206 197 aa15.04■□□□□ -0
LSM6-201ENST00000296581 MUM1Q2TAK8 710 aa15.04■□□□□ -0
LSM6-201ENST00000296581 CNPY1Q3B7I2 92 aa15.04■□□□□ -0
LSM6-201ENST00000296581 MMEL1Q495T6 779 aa15.04■□□□□ -0
LSM6-201ENST00000296581 COQ5Q5HYK3 327 aa15.04■□□□□ -0
LSM6-201ENST00000296581 CYP20A1Q6UW02 462 aa15.04■□□□□ -0
LSM6-201ENST00000296581 TMEM145Q8NBT3 493 aa15.04■□□□□ -0
LSM6-201ENST00000296581 PROKR1Q8TCW9 393 aa15.04■□□□□ -0
LSM6-201ENST00000296581 SETD7Q8WTS6 366 aaKnown RBP15.04■□□□□ -0
LSM6-201ENST00000296581 NEIL2Q969S2 332 aa15.04■□□□□ -0
LSM6-201ENST00000296581 MTFMTQ96DP5 389 aaKnown RBP15.04■□□□□ -0
LSM6-201ENST00000296581 TEX37Q96LM6 180 aa15.04■□□□□ -0
LSM6-201ENST00000296581 WDR92Q96MX6 357 aa15.04■□□□□ -0
LSM6-201ENST00000296581 OR2M4Q96R27 311 aa15.04■□□□□ -0
LSM6-201ENST00000296581 INSM2Q96T92 566 aaPredicted RBP15.04■□□□□ -0
LSM6-201ENST00000296581 MENTQ9BUN1 341 aa15.04■□□□□ -0
LSM6-201ENST00000296581 CCDC177Q9NQR7 707 aaPredicted RBP15.04■□□□□ -0
LSM6-201ENST00000296581 SPATA7Q9P0W8 599 aa15.04■□□□□ -0
LSM6-201ENST00000296581 MOSPD1Q9UJG1 213 aa15.04■□□□□ -0
LSM6-201ENST00000296581 LRCH1Q9Y2L9 728 aa15.04■□□□□ -0
LSM6-201ENST00000296581 NDUFAF1Q9Y375 327 aa15.04■□□□□ -0
LSM6-201ENST00000296581 GPSM3Q9Y4H4 160 aa15.04■□□□□ -0
LSM6-201ENST00000296581 POLR3HQ9Y535 204 aaPredicted RBP15.04■□□□□ -0
LSM6-201ENST00000296581 HS3ST3A1Q9Y663 406 aa15.04■□□□□ -0
LSM6-201ENST00000296581 TOR1BO14657 336 aa15.03■□□□□ -0
LSM6-201ENST00000296581 MRASO14807 208 aa15.03■□□□□ -0
LSM6-201ENST00000296581 PI15O43692 258 aa15.03■□□□□ -0
LSM6-201ENST00000296581 CIB2O75838 187 aa15.03■□□□□ -0
LSM6-201ENST00000296581 IGHV4-34P06331 123 aa15.03■□□□□ -0
LSM6-201ENST00000296581 G6PDP11413 515 aa15.03■□□□□ -0
LSM6-201ENST00000296581 IDSP22304 550 aa15.03■□□□□ -0
LSM6-201ENST00000296581 YPEL5P62699 121 aa15.03■□□□□ -0
LSM6-201ENST00000296581 KPNB1Q14974 876 aaKnown RBP15.03■□□□□ -0
LSM6-201ENST00000296581 KIAA0040Q15053 153 aa15.03■□□□□ -0
LSM6-201ENST00000296581 CYP2A13Q16696 494 aa15.03■□□□□ -0
LSM6-201ENST00000296581 TRMT5Q32P41 509 aaKnown RBP15.03■□□□□ -0
LSM6-201ENST00000296581 TPRG1LQ5T0D9 272 aa15.03■□□□□ -0
LSM6-201ENST00000296581 KIAA0895LQ68EN5 471 aa15.03■□□□□ -0
LSM6-201ENST00000296581 RETREG3Q86VR2 466 aa15.03■□□□□ -0
LSM6-201ENST00000296581 ADHFE1Q8IWW8 467 aa15.03■□□□□ -0
LSM6-201ENST00000296581 FBXW8Q8N3Y1 598 aa15.03■□□□□ -0
LSM6-201ENST00000296581 OR1E3Q8WZA6 343 aa15.03■□□□□ -0
LSM6-201ENST00000296581 IL17FQ96PD4 163 aa15.03■□□□□ -0
LSM6-201ENST00000296581 OSGEPL1Q9H4B0 414 aa15.03■□□□□ -0
LSM6-201ENST00000296581 EHD1Q9H4M9 534 aa15.03■□□□□ -0
LSM6-201ENST00000296581 ACTL8Q9H568 366 aa15.03■□□□□ -0
LSM6-201ENST00000296581 C6orf106Q9H6K1 298 aaPredicted RBP15.03■□□□□ -0
LSM6-201ENST00000296581 CARS2Q9HA77 564 aaKnown RBP15.03■□□□□ -0
LSM6-201ENST00000296581 CYP8B1Q9UNU6 501 aa15.03■□□□□ -0
LSM6-201ENST00000296581 EIF3LQ9Y262 564 aaKnown RBP15.03■□□□□ -0
LSM6-201ENST00000296581 DYRK1BQ9Y463 629 aa15.03■□□□□ -0
LSM6-201ENST00000296581 CFAP20Q9Y6A4 193 aaKnown RBP15.03■□□□□ -0
LSM6-201ENST00000296581 PRUNE2Q8WUY3 3088 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms