RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 SLC16A5O15375 505 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 SLCO2B1O94956 709 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 ZNF682O95780 498 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 FTH1P02794 183 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 HOXB9P17482 250 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 PDHA2P29803 388 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 METAP1P53582 386 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 DOC2AQ14183 400 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 LAPTM4AQ15012 233 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 LRRC23Q53EV4 343 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 ARHGAP15Q53QZ3 475 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 ST13P5Q8NFI4 369 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 ERLEC1Q96DZ1 483 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 PANX1Q96RD7 426 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 MBOAT4Q96T53 435 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 FAM118AQ9NWS6 357 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 THG1LQ9NWX6 298 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 IL36AQ9UHA7 158 aa17.8■□□□□ 0.44
SHKBP1-201ENST00000291842 KIAA0100Q14667 2235 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 KPNA5O15131 536 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 HS6ST1O60243 411 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 CPSF4O95639 269 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 RETP07949 1114 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 PFKLP17858 780 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 PRPH2P23942 346 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 ACOX1Q15067 660 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 ZNF77Q15935 545 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 UGT8Q16880 541 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 ZCCHC8Q6NZY4 707 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 ZNF621Q6ZSS3 439 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 CLECL1Q8IZS7 167 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 TRAM1L1Q8N609 369 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 DDHD1Q8NEL9 900 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 TMEM159Q96B96 161 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 FBXL8Q96CD0 374 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 OR4K3Q96R72 315 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 COQ6Q9Y2Z9 468 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 TMED5Q9Y3A6 229 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 PCDHGA8Q9Y5G5 932 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 NOTCH4Q99466 2003 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 FPGTO14772 594 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 ETHE1O95571 254 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 GSTM1P09488 218 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 NNMTP40261 264 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 TPD52P55327 224 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 PPP2R2BQ00005 443 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 GSTM4Q03013 218 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 ZNF284Q2VY69 593 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 AGTRAPQ6RW13 159 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 TMEM26Q6ZUK4 368 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 SPRED2Q7Z698 418 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 TRIM74Q86UV6 250 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 ALDH16A1Q8IZ83 802 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 MRPL43Q8N983 215 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 BTN2A2Q8WVV5 523 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 DPH2Q9BQC3 489 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 EXD2Q9NVH0 621 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 CXXC1Q9P0U4 656 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 STOX2Q9P2F5 926 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 VPS29Q9UBQ0 182 aa17.79■□□□□ 0.44
SHKBP1-201ENST00000291842 YY2O15391 372 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 EFCAB14O75071 495 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 SLC16A8O95907 504 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 COX7A2P14406 83 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 ENGP17813 658 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 DCTP40126 519 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 HLCSP50747 726 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 KCNAB2Q13303 367 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 TSTA3Q13630 321 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 MEP1AQ16819 746 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 GRASPQ7Z6J2 395 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 PYURFQ96I23 114 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 REXO5Q96IC2 774 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 ZSCAN5AQ9BUG6 496 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 VNN3Q9NY84 501 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 BTBD3Q9Y2F9 522 aa17.78■□□□□ 0.44
SHKBP1-201ENST00000291842 CARNS1A5YM72 827 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 WNT9AO14904 365 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 FOXD2O60548 495 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 DIRAS1O95057 198 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 ATE1O95260 518 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 ELFN1P0C7U0 828 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 EPCAMP16422 314 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 DCDC1P59894 354 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 ABHD18Q0P651 414 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 MESP2Q0VG99 397 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 TMEM115Q12893 351 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 C16orf72Q14CZ0 275 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 ZNF805Q5CZA5 627 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 TCEAL5Q5H9L2 206 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 TMEM220Q6QAJ8 160 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 THAP5Q7Z6K1 395 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 ADHFE1Q8IWW8 467 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 C8orf59Q8N0T1 100 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 WDR20Q8TBZ3 569 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 CSGALNACT1Q8TDX6 532 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 NELL1Q92832 810 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 AP2M1Q96CW1 435 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 SGK2Q9HBY8 427 aa17.77■□□□□ 0.44
SHKBP1-201ENST00000291842 CLIC1O00299 241 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms