RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 UGT8Q16880 541 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 LACTB2Q53H82 288 aaPredicted RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 SPANXN3Q5MJ09 141 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 THEMIS2Q5TEJ8 643 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 TRMT10BQ6PF06 316 aaKnown RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 SHISA6Q6ZSJ9 500 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 TTLL10Q6ZVT0 673 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 PCGF5Q86SE9 256 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 MCATQ8IVS2 390 aaKnown RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 PRSS58Q8IYP2 241 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 TTC29Q8NA56 475 aaPredicted RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 OR2L3Q8NG85 312 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 OR9A1PQ8NGU1 263 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 MAGEC3Q8TD91 643 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 SLC22A18Q96BI1 424 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 CERS2Q96G23 380 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 SNF8Q96H20 258 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 PKP4Q99569 1192 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 EBNA1BP2Q99848 306 aaKnown RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 WDR83Q9BRX9 315 aaKnown RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 AARSD1Q9BTE6 412 aaKnown RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 ADNPQ9H2P0 1102 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 SYTL2Q9HCH5 934 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 SLC6A20Q9NP91 592 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 ACSS2Q9NR19 701 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 FAM114A2Q9NRY5 505 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 SPATA7Q9P0W8 599 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 IFT80Q9P2H3 777 aaPredicted RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 ZC3H7BQ9UGR2 993 aaKnown RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 TLK1Q9UKI8 766 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 TCFL5Q9UL49 500 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 MED16Q9Y2X0 877 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 SNX24Q9Y343 169 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 PTRH2Q9Y3E5 179 aaKnown RBP9.38□□□□□ -0.91
CCDC58-201ENST00000291458 MAU2Q9Y6X3 613 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 FAM169AQ9Y6X4 670 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 MED13Q9UHV7 2174 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 HEATR5BQ9P2D3 2071 aa9.38□□□□□ -0.91
CCDC58-201ENST00000291458 FASNP49327 2511 aaKnown RBP9.37□□□□□ -0.91
CCDC58-201ENST00000291458 NUP210LQ5VU65 1888 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 A0A1W2PPV9 198 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 MAGEB16A2A368 324 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 MKRN2OSH3BPM6 223 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 FFAR3O14843 346 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 GPR42O15529 346 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 CTSVO60911 334 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 LILRA1O75019 489 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 PSIP1O75475 530 aaKnown RBP9.37□□□□□ -0.91
CCDC58-201ENST00000291458 PIAS1O75925 651 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 MATN4O95460 622 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 HBQ1P09105 142 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 SFTPCP11686 197 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 IVDP26440 423 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 CMPK1P30085 196 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 CASQ1P31415 396 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 FOLR3P41439 243 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 CCL11P51671 97 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 ADARP55265 1226 aaKnown RBP9.37□□□□□ -0.91
CCDC58-201ENST00000291458 CDKN2DP55273 166 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 ARL4CP56559 192 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 PDIA2Q13087 525 aaKnown RBP9.37□□□□□ -0.91
CCDC58-201ENST00000291458 MORF4L2Q15014 288 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 ZNF385CQ66K41 422 aaPredicted RBP9.37□□□□□ -0.91
CCDC58-201ENST00000291458 FRMPD2BQ6IN97 320 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 RHBDD2Q6NTF9 364 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 HIBCHQ6NVY1 386 aaPredicted RBP9.37□□□□□ -0.91
CCDC58-201ENST00000291458 MRPL14Q6P1L8 145 aaKnown RBP9.37□□□□□ -0.91
CCDC58-201ENST00000291458 TLDC1Q6P9B6 456 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 SYT10Q6XYQ8 523 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 UBE2R2Q712K3 238 aaPredicted RBP9.37□□□□□ -0.91
CCDC58-201ENST00000291458 PLD3Q8IV08 490 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 PDIK1LQ8N165 341 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 C2CD4AQ8NCU7 369 aaPredicted RBP9.37□□□□□ -0.91
CCDC58-201ENST00000291458 KCNJ9Q92806 393 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 INPP5DQ92835 1189 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 SLCO2A1Q92959 643 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 LINGO1Q96FE5 620 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 LRFN5Q96NI6 719 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 RUNDC3BQ96NL0 473 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 GBP5Q96PP8 586 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 DPH7Q9BTV6 452 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 GPR87Q9BY21 358 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 NLNQ9BYT8 704 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 MRPS30Q9NP92 439 aaKnown RBP9.37□□□□□ -0.91
CCDC58-201ENST00000291458 CUTCQ9NTM9 273 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 LUZP4Q9P127 313 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 SRPK3Q9UPE1 567 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 PADI2Q9Y2J8 665 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 AP1M2Q9Y6Q5 423 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 PIEZO2Q9H5I5 2752 aa9.37□□□□□ -0.91
CCDC58-201ENST00000291458 BAHCC1Q9P281 2608 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 SEC16AO15027 2179 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 LOC105369274A0A096LPK9 316 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 LOC102723532A0A0G2JNH3 316 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 A0A1B0GX78 115 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 CCDC188H7C350 402 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 MYO1CO00159 1063 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 CNOT3O75175 753 aaKnown RBP9.36□□□□□ -0.91
CCDC58-201ENST00000291458 SEC31AO94979 1220 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms