RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 FADS2O95864 444 aaKnown RBP18.06■□□□□ 0.48
PCDH1-201ENST00000287008 GSRP00390 522 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 TM4SF4P48230 202 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 MYBPC3Q14896 1274 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 TOR1AIP1Q5JTV8 583 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 ZNF598Q86UK7 904 aaKnown RBP18.06■□□□□ 0.48
PCDH1-201ENST00000287008 OXR1Q8N573 874 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 C8orf33Q9H7E9 229 aaPredicted RBP18.06■□□□□ 0.48
PCDH1-201ENST00000287008 PLEKHA1Q9HB21 404 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 Q9N2J8 555 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 FLRT1Q9NZU1 646 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 C19orf25Q9UFG5 118 aaPredicted RBP18.06■□□□□ 0.48
PCDH1-201ENST00000287008 PIAS3Q9Y6X2 628 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 OR5K4A6NMS3 321 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 CLIC1O00299 241 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 COQ9O75208 318 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 PLGP00747 810 aaPredicted RBP18.06■□□□□ 0.48
PCDH1-201ENST00000287008 ZNF433Q8N7K0 673 aaPredicted RBP18.06■□□□□ 0.48
PCDH1-201ENST00000287008 YIPF4Q9BSR8 244 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 FAM221BA6H8Z2 402 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 HMGB3O15347 200 aaKnown RBP18.06■□□□□ 0.48
PCDH1-201ENST00000287008 ANGPTL1O95841 491 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 NCK1P16333 377 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 NTSR1P30989 418 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 GPR68Q15743 365 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 LPCAT4Q643R3 524 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 FRRS1Q6ZNA5 592 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 TRPV1Q8NER1 839 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 MAPK15Q8TD08 544 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 SIGLEC10Q96LC7 697 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 TMEM138Q9NPI0 162 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 RGS10O43665 173 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 ASNA1O43681 348 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 MPZL2O60487 215 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 PRAMEF12O95522 483 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 POLR2CP19387 275 aaPredicted RBP18.06■□□□□ 0.48
PCDH1-201ENST00000287008 PTPRCAPQ14761 206 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 GPR107Q5VW38 600 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 TMEM198Q66K66 360 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 ZNF572Q7Z3I7 529 aaPredicted RBP18.06■□□□□ 0.48
PCDH1-201ENST00000287008 CBR4Q8N4T8 237 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 ANKLE1Q8NAG6 615 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 OR4F6Q8NGB9 312 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 P2RX2Q9UBL9 471 aa18.06■□□□□ 0.48
PCDH1-201ENST00000287008 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 FAM72CH0Y354 149 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 CNMDO75829 334 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 POU2F1P14859 743 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 FOSL2P15408 326 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 GJA5P36382 358 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 NOVP48745 357 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 PRRT3Q5FWE3 981 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 PLEKHS1Q5SXH7 462 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 FAM72AQ5TYM5 149 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 FAM72DQ6L9T8 149 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 GPRIN1Q7Z2K8 1008 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 MRPL10Q7Z7H8 261 aaKnown RBP18.05■□□□□ 0.48
PCDH1-201ENST00000287008 FAM72BQ86X60 149 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 ZNF483Q8TF39 744 aaPredicted RBP18.05■□□□□ 0.48
PCDH1-201ENST00000287008 WDR60Q8WVS4 1066 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 ZNF347Q96SE7 839 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 COQ7Q99807 217 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 SLC35A5Q9BS91 424 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 KLF15Q9UIH9 416 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 TMED5Q9Y3A6 229 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 PLK4O00444 970 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 LDB2O43679 373 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 PSMA1P25786 263 aaKnown RBP18.05■□□□□ 0.48
PCDH1-201ENST00000287008 ETV3P41162 512 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 WDR4P57081 412 aaKnown RBP18.05■□□□□ 0.48
PCDH1-201ENST00000287008 HYAL2Q12891 473 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCDH1-201ENST00000287008 PEX13Q92968 403 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 OR51B5Q9H339 312 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 TPK1Q9H3S4 243 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 AKTIPQ9H8T0 292 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 UTS2RQ9UKP6 389 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 PHF24Q9UPV7 400 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 KAT6AQ92794 2004 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 GNB5O14775 395 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 DNAJB1P25685 340 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 DSTNP60981 165 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 CCINQ13939 588 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 TGFBIQ15582 683 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 FBXO43Q4G163 708 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 SMARCD3Q6STE5 483 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 LRRC15Q8TF66 581 aa18.05■□□□□ 0.48
PCDH1-201ENST00000287008 MRM3Q9HC36 420 aaKnown RBP18.05■□□□□ 0.48
PCDH1-201ENST00000287008 IQCMA0A1B0GVH7 501 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 EBLN1P0CF75 366 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 RIPK1Q13546 671 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 SUSD1Q6UWL2 747 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 TMCO2Q7Z6W1 182 aaPredicted RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 PARP8Q8N3A8 854 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 TSEN15Q8WW01 171 aaKnown RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 IMP4Q96G21 291 aaKnown RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 ZBED3Q96IU2 234 aaPredicted RBP18.04■□□□□ 0.48
PCDH1-201ENST00000287008 IFT27Q9BW83 186 aa18.04■□□□□ 0.48
PCDH1-201ENST00000287008 OR51V1Q9H2C8 321 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms