RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ANKRD33BA6NCL7 494 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 J3KR12 359 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 SCAMP1O15126 338 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 PRODHO43272 600 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 IL7P13232 177 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 IDSP22304 550 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 MAGEA2P43356 314 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 PRR5P85299 388 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 ZNF311Q5JNZ3 666 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 ADNP2Q6IQ32 1131 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 FUT10Q6P4F1 479 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 LINGO2Q7L985 606 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 FAM129CQ86XR2 697 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 GJD3Q8N144 294 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 OR4C6Q8NH72 309 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 NEK7Q8TDX7 302 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 CPQQ9Y646 472 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 A0A1W2PP18 115 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 A8MV72 311 aaPredicted RBP16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 RFPL1O75677 317 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 ADH1CP00326 375 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 GLUD1P00367 558 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 ITGB1P05556 798 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 FGF3P11487 239 aaPredicted RBP16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 HLCSP50747 726 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 HSD17B12Q53GQ0 312 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 GALNTL5Q7Z4T8 443 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 PQLC3Q8N755 202 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 IFT27Q9BW83 186 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 MIR1-1HGQ9H1L0 117 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 IL1RAPQ9NPH3 570 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 PAK6Q9NQU5 681 aaPredicted RBP16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 KCTD3Q9Y597 815 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC6A4P31645 630 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 FLT3LGP49771 235 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 CREB5Q02930 508 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 PON2Q15165 354 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 FBXO42Q6P3S6 717 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 TIFABQ6ZNK6 161 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 ATCAYQ86WG3 371 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 PEBP4Q96S96 227 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 PKP4Q99569 1192 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 DEC1Q9P2X7 70 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 DAPL1A0PJW8 107 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 H0YAE9 185 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 RNASEH2AO75792 299 aaKnown RBP16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 KRT33AO76009 404 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 OR7A10O76100 309 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 G6PDP11413 515 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 GDF5P43026 501 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 XKP51811 444 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 NKX2-5P52952 324 aaPredicted RBP16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 TMIEQ8NEW7 156 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 DDX1Q92499 740 aaKnown RBP16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 SMURF2Q9HAU4 748 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 XPNPEP2O43895 674 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 ZNF432O94892 652 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 PCCBP05166 539 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 MSANTD2Q6P1R3 559 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 PTPRJQ12913 1337 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 IRAK1BP1Q5VVH5 260 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC37A3Q8NCC5 494 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 CRELD1Q96HD1 420 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 KCTD7Q96MP8 289 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 COL21A1Q96P44 957 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 RPF2Q9H7B2 306 aaKnown RBP16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 FLRT1Q9NZU1 646 aa16.07■□□□□ 0.16
SH3RF1-201ENST00000284637 MYO5BQ9ULV0 1848 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 HAS3O00219 553 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 ALPIP09923 528 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 GIMD1P0DJR0 217 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 PEPDP12955 493 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 HTR2BP41595 481 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 PSMD8P48556 350 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 TSTQ16762 297 aaKnown RBP16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 ATP13A5Q4VNC0 1218 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 CDHR3Q6ZTQ4 885 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 SNX20Q7Z614 316 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 ZCCHC10Q8TBK6 192 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 BARD1Q99728 777 aaKnown RBP16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 TXLNGYQ9BZA5 131 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 VPS29Q9UBQ0 182 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 REM1O75628 298 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 OR2B3O76000 313 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 DBIP07108 87 aaKnown RBP16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 RPS3P23396 243 aaKnown RBP eCLIP16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 AVPR1BP47901 424 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 IQCHQ86VS3 1027 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 RANBP3LQ86VV4 465 aaPredicted RBP16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC35F5Q8WV83 523 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 RELTQ969Z4 430 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 PITPNM1O00562 1244 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 CCL16O15467 120 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 SLITRK5O94991 958 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 TGFB1P01137 390 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 F8A1P23610 371 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 RPS3AP61247 264 aaKnown RBP16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 PPP1R3AQ16821 1122 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 FBXL22Q6P050 247 aa16.06■□□□□ 0.16
SH3RF1-201ENST00000284637 CAND1Q86VP6 1230 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms