RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 TADA1Q96BN2 335 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 CWH43Q9H720 699 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 ABCC13Q9NSE7 274 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 C14orf119Q9NWQ9 140 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 SCN3BQ9NY72 215 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 CRNNQ9UBG3 495 aaPredicted RBP11.05□□□□□ -0.64
SCLT1-201ENST00000281142 GOLGA8CPA6NN73 597 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 AIREO43918 545 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 PCDHGA12O60330 932 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 MSH3P20585 1137 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 CDKN2CP42773 168 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 RUNDC3AQ59EK9 446 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 MS4A13Q5J8X5 152 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 TPRG1LQ5T0D9 272 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 NXNL2Q5VZ03 156 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 CD300LGQ6UXG3 332 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 VTCN1Q7Z7D3 282 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 SCN4BQ8IWT1 228 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 TMEM86AQ8N2M4 240 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 TTC29Q8NA56 475 aaPredicted RBP11.05□□□□□ -0.64
SCLT1-201ENST00000281142 MDGA1Q8NFP4 955 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 BRSK1Q8TDC3 778 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 APH1BQ8WW43 257 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 MTFMTQ96DP5 389 aaKnown RBP11.05□□□□□ -0.64
SCLT1-201ENST00000281142 MRPL9Q9BYD2 267 aaKnown RBP11.05□□□□□ -0.64
SCLT1-201ENST00000281142 UGT2A1Q9Y4X1 527 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 CCL27Q9Y4X3 112 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 PATJQ8NI35 1801 aa11.05□□□□□ -0.64
SCLT1-201ENST00000281142 COL4A4P53420 1690 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 GRXCR1A8MXD5 290 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 CCRL2O00421 344 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 PER2O15055 1255 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 SCELO95171 688 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 VIPP01282 170 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 PGRP06401 933 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 RGRP47804 291 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 OR1G1P47890 313 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 HSPA7P48741 367 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 HTRA4P83105 476 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 CAPN13Q6MZZ7 669 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 HIPK1Q86Z02 1210 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 TEX26Q8N6G2 289 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 SPERTQ8NA61 448 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 GPR152Q8TDT2 470 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 PYURFQ96I23 114 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 DMRTB1Q96MA1 342 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 Q96MT0 163 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 FAM193BQ96PV7 902 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 BCL7BQ9BQE9 202 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 CDADC1Q9BWV3 514 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 FBXL12Q9NXK8 326 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 ZNF451Q9Y4E5 1061 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 NLRC5Q86WI3 1866 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 NT5C1B-RDH14C9J2C7 533 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 H0Y626 953 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 ALX3O95076 343 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 MFN2O95140 757 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 TRIM16O95361 564 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 PCSK1P29120 753 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 AKT1P31749 480 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 NRIP1P48552 1158 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 TP53BP2Q13625 1128 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 CEP78Q5JTW2 689 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 FAM171A1Q5VUB5 890 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 FAM171BQ6P995 826 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 SHQ1Q6PI26 577 aaKnown RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 TMEM173Q86WV6 379 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 FAM20CQ8IXL6 584 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 SDR16C5Q8N3Y7 309 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 BEND7Q8N7W2 519 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 FAM120BQ96EK7 910 aaKnown RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 PDLIM5Q96HC4 596 aaKnown RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 OR52E6Q96RD3 313 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 DPY30Q9C005 99 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 REXO4Q9GZR2 422 aaKnown RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 OR51E2Q9H255 320 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 NSUN3Q9H649 340 aaKnown RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 IPPKQ9H8X2 491 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 PDP1Q9P0J1 537 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 FKBPLQ9UIM3 349 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 TRMT6Q9UJA5 497 aaKnown RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 PRG3Q9Y2Y8 225 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-201ENST00000281142 COMMD10Q9Y6G5 202 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 MYO16Q9Y6X6 1858 aa11.04□□□□□ -0.64
SCLT1-201ENST00000281142 B3GAT3O94766 335 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 FGF1P05230 155 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 RPL9P32969 192 aaKnown RBP11.03□□□□□ -0.64
SCLT1-201ENST00000281142 SLC11A1P49279 550 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 ZNF140P52738 457 aaPredicted RBP11.03□□□□□ -0.64
SCLT1-201ENST00000281142 NUDT6P53370 316 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 IL18R1Q13478 541 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 GTF2H2Q13888 395 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 ZNF181Q2M3W8 571 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 FBXL22Q6P050 247 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 GTF2H2CQ6P1K8 395 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 MIB1Q86YT6 1006 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 KIAA1958Q8N8K9 716 aa11.03□□□□□ -0.64
SCLT1-201ENST00000281142 ASCC1Q8N9N2 400 aaKnown RBP11.03□□□□□ -0.64
SCLT1-201ENST00000281142 SETD9Q8NE22 299 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms