RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.28□□□□□ -1.4
CD44-204ENST00000279452 LGSNQ5TDP6 509 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 ARHGAP40Q5TG30 622 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 C1orf189Q5VU69 101 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 FCRL6Q6DN72 434 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 KLC3Q6P597 504 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 BPHLQ86WA6 291 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 C17orf64Q86WR6 236 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 GPSM1Q86YR5 675 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 MCATQ8IVS2 390 aaKnown RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 ESX1Q8N693 406 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 METTL27Q8N6F8 245 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 ZNF655Q8N720 491 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 TTC29Q8NA56 475 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 ZSCAN1Q8NBB4 408 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 OR2A1Q8NGT9 310 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 OR8K5Q8NH50 307 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 FLVCR1-AS1Q8TAF5 88 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 HMGCLL1Q8TB92 370 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 KCTD4Q8WVF5 259 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 SLC44A1Q8WWI5 657 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 ATL1Q8WXF7 558 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 DLG3Q92796 817 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 RERGQ96A58 199 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 CABS1Q96KC9 395 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 SCYL1Q96KG9 808 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 FCRL4Q96PJ5 515 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 CCNL2Q96S94 520 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 ZFYVE21Q9BQ24 234 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 NDC1Q9BTX1 674 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 DPH1Q9BZG8 443 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 DERL2Q9GZP9 239 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 SPRTNQ9H040 489 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 PCBD2Q9H0N5 130 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 ALG9Q9H6U8 611 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 ANKZF1Q9H8Y5 726 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 NMRAL1Q9HBL8 299 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 CPNE5Q9HCH3 593 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 SLC6A20Q9NP91 592 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 STARD5Q9NSY2 213 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 CUEDC1Q9NWM3 386 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 EURLQ9NYK6 297 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 SEMA5BQ9P283 1151 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 TBK1Q9UHD2 729 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 METRNQ9UJH8 293 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 PILRAQ9UKJ1 303 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 ACOT9Q9Y305 439 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 DYRK1BQ9Y463 629 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 OARD1Q9Y530 152 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 A0A087WV48 116 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 IQANK1A0A1B0GTG1 560 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 FEZF1A0PJY2 475 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 C9J4A7 227 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 H7BY64 318 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 CLGNO14967 610 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 HCRTR1O43613 425 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 CCNT2O60583 730 aaKnown RBP6.27□□□□□ -1.41
CD44-204ENST00000279452 FKBP9O95302 570 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 DLGAP3O95886 979 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 STATHP02808 62 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 CAPNS1P04632 268 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 SERPIND1P05546 499 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 C2P06681 752 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 ABHD2P08910 425 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 HBQ1P09105 142 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 PRKAR1AP10644 381 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 CDH1P12830 882 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 GFAPP14136 432 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 LIFP15018 202 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 CD1DP15813 335 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 AGXTP21549 392 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 ALAS2P22557 587 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 CNTFP26441 200 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 TNFRSF8P28908 595 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 ARL1P40616 181 aaPredicted RBP6.27□□□□□ -1.41
CD44-204ENST00000279452 SLCO1A2P46721 670 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 UCNP55089 124 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 VSNL1P62760 191 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 ABATP80404 500 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 PRDX1Q06830 199 aaKnown RBP6.27□□□□□ -1.41
CD44-204ENST00000279452 IFFO1Q0D2I5 559 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 SLC9A5Q14940 896 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 TGFBIQ15582 683 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 OR4D1Q15615 310 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 ERCC6LQ2NKX8 1250 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 PTCHD3Q3KNS1 767 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 FBXO48Q5FWF7 155 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 C16orf46Q6P387 395 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 TLDC1Q6P9B6 456 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 FAM199XQ6PEV8 388 aaPredicted RBP6.27□□□□□ -1.41
CD44-204ENST00000279452 SBSNQ6UWP8 590 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 TIPARPQ7Z3E1 657 aaKnown RBP6.27□□□□□ -1.41
CD44-204ENST00000279452 TMPRSS11BQ86T26 416 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 THOC6Q86W42 341 aaKnown RBP6.27□□□□□ -1.41
CD44-204ENST00000279452 PLD3Q8IV08 490 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 TBC1D19Q8N5T2 526 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 SNX31Q8N9S9 440 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 STAG3L4Q8TBR4 150 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 NKD1Q969G9 470 aa6.27□□□□□ -1.41
CD44-204ENST00000279452 ZUFSPQ96AP4 578 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms