RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 KLK6Q92876 244 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 GATA6Q92908 595 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 RAD51AP1Q96B01 352 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 TESCQ96BS2 214 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 WDR34Q96EX3 536 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 EGLN2Q96KS0 407 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 BTBD9Q96Q07 612 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 HHIPQ96QV1 700 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 NR1H4Q96RI1 486 aaPredicted RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 MKRN2Q9H000 416 aaKnown RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 PIF1Q9H611 641 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 FBXL12Q9NXK8 326 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 LMCD1Q9NZU5 365 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 CNOT11Q9UKZ1 510 aaKnown RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 USP22Q9UPT9 525 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 RUVBL1Q9Y265 456 aaKnown RBP9.28□□□□□ -0.92
TRIM55-201ENST00000276573 DYRK1BQ9Y463 629 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 PCDHB3Q9Y5E6 796 aa9.28□□□□□ -0.92
TRIM55-201ENST00000276573 TCRBV5S2A0A599 114 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 DHRS12A0PJE2 317 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 MAGEB17A8MXT2 336 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 HNRNPRO43390 633 aaKnown RBP9.27□□□□□ -0.93
TRIM55-201ENST00000276573 PI15O43692 258 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 ERN1O75460 977 aaKnown RBP9.27□□□□□ -0.93
TRIM55-201ENST00000276573 NCK1P16333 377 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 PRPS1L1P21108 318 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 KELP23276 732 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 MTPNP58546 118 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 RPS21P63220 83 aaKnown RBP9.27□□□□□ -0.93
TRIM55-201ENST00000276573 SGCGQ13326 291 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 DDX39BQ13838 428 aaKnown RBP9.27□□□□□ -0.93
TRIM55-201ENST00000276573 CATSPEREQ5SY80 951 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 ATG9BQ674R7 924 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 HMBOX1Q6NT76 420 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 MED27Q6P2C8 311 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 AMIGO2Q86SJ2 522 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 PDZD3Q86UT5 571 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 MSRB3Q8IXL7 192 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 ADGRG5Q8IZF4 528 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 IL17RCQ8NAC3 791 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 CHTF18Q8WVB6 975 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 TFGQ92734 400 aaPredicted RBP9.27□□□□□ -0.93
TRIM55-201ENST00000276573 FAM131CQ96AQ9 280 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 BIRC7Q96CA5 298 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 C11orf24Q96F05 449 aaPredicted RBP9.27□□□□□ -0.93
TRIM55-201ENST00000276573 ZNF583Q96ND8 569 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 PAIP1Q9H074 479 aaKnown RBP9.27□□□□□ -0.93
TRIM55-201ENST00000276573 KCNH6Q9H252 994 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 SEMA6AQ9H2E6 1030 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 ZNF576Q9H609 170 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 TM7SF3Q9NS93 570 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 PPT2Q9UMR5 302 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 ASF1AQ9Y294 204 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 MAN2B2Q9Y2E5 1009 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 OR1A2Q9Y585 309 aa9.27□□□□□ -0.93
TRIM55-201ENST00000276573 TRBV5-3A0A0A0MS03 114 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 MAGEA13PA6NCF6 341 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 GPR89AB7ZAQ6 455 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 PLRG1O43660 514 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 PRMT3O60678 531 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 ADAM23O75077 832 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 TIPRLO75663 272 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 EGFP01133 1207 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 DNTTP04053 509 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 FUCA1P04066 466 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 GPIP06744 558 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 GPR89BP0CG08 455 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 UMPSP11172 480 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 PCNAP12004 261 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 HRH2P25021 359 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 CTHP32929 405 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 BMP8BP34820 402 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 MRPS35P82673 323 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 FOLH1Q04609 750 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 CYP4F3Q08477 520 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 TSTA3Q13630 321 aaPredicted RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 IRF4Q15306 451 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 PGS1Q32NB8 556 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 TBCELQ5QJ74 424 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 LRIF1Q5T3J3 769 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 GLYATQ6IB77 296 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 NXPE4Q6UWF7 544 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 TMPRSS11BQ86T26 416 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 SYT12Q8IV01 421 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 LAS2Q8IYD9 372 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 PAPD5Q8NDF8 572 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 TRPV3Q8NET8 790 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 OR5AR1Q8NGP9 310 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 OR14C36Q8NHC7 312 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 HUS1BQ8NHY5 278 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 FAM110BQ8TC76 370 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 REPS1Q96D71 796 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 ITCHQ96J02 903 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 NECTIN4Q96NY8 510 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 SH3GL1Q99961 368 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 THUMPD3Q9BV44 507 aaKnown RBP9.26□□□□□ -0.93
TRIM55-201ENST00000276573 SLC17A9Q9BYT1 436 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 SLC6A17Q9H1V8 727 aa9.26□□□□□ -0.93
TRIM55-201ENST00000276573 EHD1Q9H4M9 534 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms