RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SLC6A20Q9NP91 592 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 SLC22A11Q9NSA0 550 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 INTS7Q9NVH2 962 aaKnown RBP13.83□□□□□ -0.2
HMGN3-201ENST00000275036 IRAK4Q9NWZ3 460 aa13.83□□□□□ -0.2
HMGN3-201ENST00000275036 IGKV1-8A0A0C4DH67 115 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 TARM1B6A8C7 271 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 VPS26AO75436 327 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 MED26O95402 600 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 ENO3P13929 434 aaPredicted RBP13.82□□□□□ -0.2
HMGN3-201ENST00000275036 AGXTP21549 392 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 PNLIPRP1P54315 467 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 DCDP81605 110 aaKnown RBP13.82□□□□□ -0.2
HMGN3-201ENST00000275036 FOXK1P85037 733 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 KLRB1Q12918 225 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 FASTKD3Q14CZ7 662 aaKnown RBP13.82□□□□□ -0.2
HMGN3-201ENST00000275036 HIF1AQ16665 826 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 MLIPQ5VWP3 458 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 ANKMY2Q8IV38 441 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 LRRC56Q8IYG6 542 aaPredicted RBP13.82□□□□□ -0.2
HMGN3-201ENST00000275036 ZNF480Q8WV37 535 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 EEF1AKMT1Q8WVE0 214 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 SMPDL3AQ92484 453 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 SNF8Q96H20 258 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 NDC1Q9BTX1 674 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 MLXIPLQ9NP71 852 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 ENAMQ9NRM1 1142 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 FAM114A2Q9NRY5 505 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 ZC3H7BQ9UGR2 993 aaKnown RBP13.82□□□□□ -0.2
HMGN3-201ENST00000275036 ADAMTS6Q9UKP5 1117 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 SRPK3Q9UPE1 567 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 SNX24Q9Y343 169 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 HECTD1Q9ULT8 2610 aa13.82□□□□□ -0.2
HMGN3-201ENST00000275036 LOC105369274A0A096LPK9 316 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 LOC102723532A0A0G2JNH3 316 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 A0A0J9YVX5 310 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 OR2A25A4D2G3 310 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 EFCAB8A8MWE9 144 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 C9J4A7 227 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 E7ENX8 843 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 MASP2O00187 686 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 SMAPO00193 183 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 CEACAM4O75871 244 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 IMPA1P29218 277 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 SKIV2L2P42285 1042 aaKnown RBP13.81□□□□□ -0.2
HMGN3-201ENST00000275036 CCL11P51671 97 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 VSX2P58304 361 aaPredicted RBP13.81□□□□□ -0.2
HMGN3-201ENST00000275036 TAP2Q03519 686 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 ATP1A4Q13733 1029 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 ARHGAP19Q14CB8 494 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 NKAIN1Q4KMZ8 207 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 ZC3H12BQ5HYM0 836 aaKnown RBP13.81□□□□□ -0.2
HMGN3-201ENST00000275036 MRPL14Q6P1L8 145 aaKnown RBP13.81□□□□□ -0.2
HMGN3-201ENST00000275036 FBXO42Q6P3S6 717 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 PAQR3Q6TCH7 311 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 KIAA0408Q6ZU52 694 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 TTLL10Q6ZVT0 673 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 UBE2R2Q712K3 238 aaPredicted RBP13.81□□□□□ -0.2
HMGN3-201ENST00000275036 RNF44Q7L0R7 432 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 OR4N4Q8N0Y3 316 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.81□□□□□ -0.2
HMGN3-201ENST00000275036 SELENOSQ9BQE4 189 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 DPH7Q9BTV6 452 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 TXLNGQ9NUQ3 528 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 TAC3Q9UHF0 121 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 TRMT6Q9UJA5 497 aaKnown RBP13.81□□□□□ -0.2
HMGN3-201ENST00000275036 SCN3AQ9NY46 2000 aa13.81□□□□□ -0.2
HMGN3-201ENST00000275036 CNTRLQ7Z7A1 2325 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 FITM1A5D6W6 292 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 CYSRT1A8MQ03 144 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 E7ESA3 106 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 EIF3FO00303 357 aaPredicted RBP13.8□□□□□ -0.2
HMGN3-201ENST00000275036 SYF2O95926 243 aaKnown RBP13.8□□□□□ -0.2
HMGN3-201ENST00000275036 ALAS2P22557 587 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 CMPK1P30085 196 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 RPA3P35244 121 aaPredicted RBP13.8□□□□□ -0.2
HMGN3-201ENST00000275036 MLLT10P55197 1068 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 ARL4CP56559 192 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 C2orf54Q08AI8 447 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 TSTA3Q13630 321 aaPredicted RBP13.8□□□□□ -0.2
HMGN3-201ENST00000275036 TCTE1Q5JU00 501 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 WASHC2DQ5SRD0 308 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 ICE2Q659A1 982 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 MBOAT1Q6ZNC8 495 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 COX15Q7KZN9 410 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 GALNT7Q86SF2 657 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 PAQR7Q86WK9 346 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 SPATA4Q8NEY3 305 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 FDCSPQ8NFU4 85 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 LRRC39Q96DD0 335 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 DHRS4Q9BTZ2 278 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 NUDT9Q9BW91 350 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 MRPS30Q9NP92 439 aaKnown RBP13.8□□□□□ -0.2
HMGN3-201ENST00000275036 PPANQ9NQ55 473 aaKnown RBP13.8□□□□□ -0.2
HMGN3-201ENST00000275036 ACSS2Q9NR19 701 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 CUTCQ9NTM9 273 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 TAS2R13Q9NYV9 303 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 IFT80Q9P2H3 777 aaPredicted RBP13.8□□□□□ -0.2
HMGN3-201ENST00000275036 PLAAQ9Y263 795 aa13.8□□□□□ -0.2
HMGN3-201ENST00000275036 PCDHGA9Q9Y5G4 932 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms