RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 CCDC151A5D8V7 595 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 CDRT15L2A8MXV6 281 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 SUPT3HB4E1H0 165 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 CDH16O75309 829 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 SUPT3HO75486 399 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 DXOO77932 396 aaKnown RBP12.27□□□□□ -0.45
SS18-202ENST00000269138 CAPNS1P04632 268 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 CTSBP07858 339 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 COL6A2P12110 1019 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 MTHFD2P13995 350 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 NPPBP16860 134 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 KRT15P19012 456 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 SLC5A2P31639 672 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 GABRA4P48169 554 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 ZNF844Q08AG5 666 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 TUBB3Q13509 450 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 COL9A2Q14055 689 aaPredicted RBP12.27□□□□□ -0.45
SS18-202ENST00000269138 TECRLQ5HYJ1 363 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 CAPN13Q6MZZ7 669 aaPredicted RBP12.27□□□□□ -0.45
SS18-202ENST00000269138 KLC3Q6P597 504 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 SH2D5Q6ZV89 423 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 IQCKQ8N0W5 287 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 DNAJC22Q8N4W6 341 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 MYRIPQ8NFW9 859 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 TCTN2Q96GX1 697 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 SCYL1Q96KG9 808 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 TMEM79Q9BSE2 394 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 FGF21Q9NSA1 209 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 PTBP2Q9UKA9 531 aaKnown RBP12.27□□□□□ -0.45
SS18-202ENST00000269138 ASB1Q9Y576 335 aa12.27□□□□□ -0.45
SS18-202ENST00000269138 MAP2K7O14733 419 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 POLR1CO15160 346 aaPredicted RBP12.26□□□□□ -0.45
SS18-202ENST00000269138 CTSVO60911 334 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 ERLIN1O75477 346 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 FKBP9O95302 570 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 SLC6A12P48065 614 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 HSPA7P48741 367 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 AGTR2P50052 363 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 FOXK2Q01167 660 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 TMTC4Q5T4D3 741 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 SULT1C3Q6IMI6 304 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 C16orf46Q6P387 395 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 IGF2-ASQ6U949 168 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 UNQ6494/PRO21346Q6UXR6 183 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 THOC6Q86W42 341 aaKnown RBP12.26□□□□□ -0.45
SS18-202ENST00000269138 LSMEM2Q8N112 164 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 TMEM151AQ8N4L1 468 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 PDPRQ8NCN5 879 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 RHEBL1Q8TAI7 183 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 ACMSDQ8TDX5 336 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 ZUFSPQ96AP4 578 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 ZNF501Q96CX3 271 aaPredicted RBP12.26□□□□□ -0.45
SS18-202ENST00000269138 CABS1Q96KC9 395 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 ZIM3Q96PE6 472 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 FCRL4Q96PJ5 515 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 TMEM109Q9BVC6 243 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 ROPN1BQ9BZX4 212 aaPredicted RBP12.26□□□□□ -0.45
SS18-202ENST00000269138 ROPN1Q9HAT0 212 aaPredicted RBP12.26□□□□□ -0.45
SS18-202ENST00000269138 WWOXQ9NZC7 414 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 NUDT4Q9NZJ9 180 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 TMEM216Q9P0N5 145 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 LGALS13Q9UHV8 139 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 SLC22A14Q9Y267 594 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 KLK4Q9Y5K2 254 aa12.26□□□□□ -0.45
SS18-202ENST00000269138 SNRNP200O75643 2136 aaKnown RBP12.25□□□□□ -0.45
SS18-202ENST00000269138 OR2A25A4D2G3 310 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 TARM1B6A8C7 271 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 TMEM150CB9EJG8 249 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 H7BY64 318 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 NVLO15381 856 aaKnown RBP12.25□□□□□ -0.45
SS18-202ENST00000269138 MAP3K7O43318 606 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 CCNDBP1O95273 360 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 TIAF1O95411 115 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 S100BP04271 92 aaPredicted RBP12.25□□□□□ -0.45
SS18-202ENST00000269138 SBK3P0C264 359 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 FGF5P12034 268 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 CDH1P12830 882 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 CCND1P24385 295 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 HNMTP50135 292 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 ABATP80404 500 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 ACY1Q03154 408 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 TSNAXIP1Q2TAA8 658 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 TBC1D25Q3MII6 688 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 CDKL4Q5MAI5 379 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 DCAF12Q5T6F0 453 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 PRAMEF17Q5VTA0 474 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 ZNF425Q6IV72 752 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 PWWP2BQ6NUJ5 590 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 FBXO42Q6P3S6 717 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 LCTLQ6UWM7 567 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 PAQR7Q86WK9 346 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 ZFAND4Q86XD8 727 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 PLD3Q8IV08 490 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 MCATQ8IVS2 390 aaKnown RBP12.25□□□□□ -0.45
SS18-202ENST00000269138 OR1L3Q8NH93 324 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 TSNARE1Q96NA8 513 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 PRAP1Q96NZ9 151 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 PLCD4Q9BRC7 762 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 DDA1Q9BW61 102 aa12.25□□□□□ -0.45
SS18-202ENST00000269138 CHRNA10Q9GZZ6 450 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms