RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ERVK-11Q9UQG0 969 aa11.27□□□□□ -0.6
VPS33A-201ENST00000267199 SERPINB7O75635 380 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 PRPS2P11908 318 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 MTAPQ13126 283 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 FNDC3BQ53EP0 1204 aaKnown RBP11.27□□□□□ -0.61
VPS33A-201ENST00000267199 LRRC73Q5JTD7 316 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 CHMP1BQ7LBR1 199 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 PYURFQ96I23 114 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 MCMBPQ9BTE3 642 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 FAM118AQ9NWS6 357 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 ERVK13-1Q9NX77 482 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 PCDHGB3Q9Y5G1 929 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 PRSS51A0A1B0GVH4 220 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 UBE2QL1A1L167 161 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 RLN1P04808 185 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 UPP1Q16831 310 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 CXXC5Q7LFL8 322 aaKnown RBP11.27□□□□□ -0.61
VPS33A-201ENST00000267199 PIGKQ92643 395 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 UBE2E3Q969T4 207 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 MTIF3Q9H2K0 278 aaKnown RBP11.27□□□□□ -0.61
VPS33A-201ENST00000267199 MEAF6Q9HAF1 191 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 NFKBIL1Q9UBC1 381 aaPredicted RBP11.27□□□□□ -0.61
VPS33A-201ENST00000267199 ARAP2Q8WZ64 1704 aa11.27□□□□□ -0.61
VPS33A-201ENST00000267199 A0A0D9SEW6 157 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 A0A1B0GTW7 788 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 SLC1A7O00341 560 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 QSOX1O00391 747 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 AP3D1O14617 1153 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 KHDRBS3O75525 346 aaKnown RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 SLC2A2P11168 524 aaPredicted RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 FPR1P21462 350 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 AGXTP21549 392 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 TUBA1BP68363 451 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ZBTB6Q15916 424 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ADGRF1Q5T601 910 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 TUBA1AQ71U36 451 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 GALNT10Q86SR1 603 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 RAVER1Q8IY67 606 aaKnown RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 TRPV1Q8NER1 839 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 CSGALNACT1Q8TDX6 532 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ZFP90Q8TF47 636 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 MYRFLQ96LU7 910 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 DERL2Q9GZP9 239 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 WDR6Q9NNW5 1121 aaKnown RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 C12orf4Q9NQ89 552 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 TMEM248Q9NWD8 314 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 RPS6KB2Q9UBS0 482 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 AASSQ9UDR5 926 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ENTPD4Q9Y227 616 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ASF1AQ9Y294 204 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 NEDD8-MDP1E9PL57 170 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 MITFO75030 526 aaPredicted RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 S1PR4O95977 384 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 BMP7P18075 431 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 SH3BP2P78314 561 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 NFKB2Q00653 900 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 SERINC3Q13530 473 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF789Q5FWF6 425 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 KIAA1614Q5VZ46 1190 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 OR52L1Q8NGH7 329 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 FRS2Q8WU20 508 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 MAGEB10Q96LZ2 347 aaPredicted RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 GSDMCQ9BYG8 508 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 MMP27Q9H306 513 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 R3HDMLQ9H3Y0 253 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ZSCAN5BA6NJL1 495 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 CAPN15O75808 1086 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 CNMDO75829 334 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 CDRT1O95170 752 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ELFN1P0C7U0 828 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 NSG1P42857 185 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 MPPE1Q53F39 396 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 TNFAIP8L2Q6P589 184 aaPredicted RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ENPP6Q6UWR7 440 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF534Q76KX8 674 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 CHERPQ8IWX8 916 aaKnown RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 MZB1Q8WU39 189 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 HSH2DQ96JZ2 352 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF607Q96SK3 696 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 PKP4Q99569 1192 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 FAM83DQ9H4H8 585 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 EQTNQ9NQ60 294 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 EIF3KQ9UBQ5 218 aaKnown RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 MKLN1Q9UL63 735 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 KNL1Q8NG31 2342 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 IQCMA0A1B0GVH7 501 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 CPSF4LA6NMK7 179 aaKnown RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 PRAMEF11O60813 436 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 CDKN2DP55273 166 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 TAS2R41P59536 307 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ELMOD2Q8IZ81 293 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 UMODL1-AS1Q8N2C9 162 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF433Q8N7K0 673 aaPredicted RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 FAM110BQ8TC76 370 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 USP7Q93009 1102 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 WDR83Q9BRX9 315 aaKnown RBP11.26□□□□□ -0.61
VPS33A-201ENST00000267199 DUSP26Q9BV47 211 aa11.26□□□□□ -0.61
VPS33A-201ENST00000267199 STOML2Q9UJZ1 356 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms