RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 GID8Q9NWU2 228 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 LEF1Q9UJU2 399 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-201ENST00000266589 PCDHGA11Q9Y5H2 935 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 NPIPB8E9PQR5 432 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 TRIM38O00635 465 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 KCNJ13O60928 360 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 ERGP11308 486 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 PCNAP12004 261 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 BCKDHAP12694 445 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 XRCC1P18887 633 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-201ENST00000266589 IDSP22304 550 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 HTR1BP28222 390 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 AKT2P31751 481 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 CCNIQ14094 377 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 ARHGAP19Q14CB8 494 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 TPRG1LQ5T0D9 272 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 ATG9BQ674R7 924 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 ADNP2Q6IQ32 1131 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 GCNT7Q6ZNI0 430 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 SYT13Q7L8C5 426 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 ZNF687Q8N1G0 1237 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 HIPK4Q8NE63 616 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 NUDT8Q8WV74 236 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 SLC5A11Q8WWX8 675 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 PDXPQ96GD0 296 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 WDR92Q96MX6 357 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 OR2M4Q96R27 311 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 FERD3LQ96RJ6 166 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 ZBTB18Q99592 522 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 NRTNQ99748 197 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 DPY30Q9C005 99 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 C6orf106Q9H6K1 298 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-201ENST00000266589 PRM3Q9NNZ6 103 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 IMP3Q9NV31 184 aaKnown RBP11.18□□□□□ -0.62
SCAF11-201ENST00000266589 C2orf42Q9NWW7 574 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 CYP8B1Q9UNU6 501 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 DLGAP4Q9Y2H0 992 aa11.18□□□□□ -0.62
SCAF11-201ENST00000266589 DYTNA2CJ06 578 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 PRR19A6NJB7 356 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 PDZK1P1A8MUH7 402 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 CHURC1-FNTBB4DL54 471 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 FXYD1O00168 92 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 IGLV3-19P01714 112 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 C1GALT1C1LP0DN25 315 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 AMD1P17707 334 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 TCN1P20061 433 aaPredicted RBP11.17□□□□□ -0.62
SCAF11-201ENST00000266589 MAPK1P28482 360 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 MSX2P35548 267 aaPredicted RBP11.17□□□□□ -0.62
SCAF11-201ENST00000266589 HSD17B2P37059 387 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 SLC7A2P52569 658 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 NFYCQ13952 458 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 LRRC32Q14392 662 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 CAPRIN1Q14444 709 aaKnown RBP11.17□□□□□ -0.62
SCAF11-201ENST00000266589 SLBPQ14493 270 aaKnown RBP eCLIP11.17□□□□□ -0.62
SCAF11-201ENST00000266589 PAGE3Q5JUK9 113 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 MED27Q6P2C8 311 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 LCTLQ6UWM7 567 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 FAM156AQ8NDB6 213 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 OR7G3Q8NG95 312 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 CLHC1Q8NHS4 586 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 SETD7Q8WTS6 366 aaKnown RBP11.17□□□□□ -0.62
SCAF11-201ENST00000266589 OR1E3Q8WZA6 343 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 JADE3Q92613 823 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 LRRC58Q96CX6 371 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 WDR34Q96EX3 536 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 APOLD1Q96LR9 279 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 GUCD1Q96NT3 240 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 HOPXQ9BPY8 73 aaPredicted RBP11.17□□□□□ -0.62
SCAF11-201ENST00000266589 GPATCH1Q9BRR8 931 aaKnown RBP11.17□□□□□ -0.62
SCAF11-201ENST00000266589 MENTQ9BUN1 341 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 EFCAB11Q9BUY7 163 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 EBF2Q9HAK2 575 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 SPATA6Q9NWH7 488 aaPredicted RBP11.17□□□□□ -0.62
SCAF11-201ENST00000266589 GEMIN8Q9NWZ8 242 aaKnown RBP11.17□□□□□ -0.62
SCAF11-201ENST00000266589 SPATA7Q9P0W8 599 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 TMEM181Q9P2C4 612 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 VPS29Q9UBQ0 182 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 TMED5Q9Y3A6 229 aa11.17□□□□□ -0.62
SCAF11-201ENST00000266589 ZNF839A8K0R7 811 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 MAGEB17A8MXT2 336 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 PRPS2P11908 318 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 HSD3B1P14060 373 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 HSD3B2P26439 372 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 DGKQP52824 942 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 MEF2AQ02078 507 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-201ENST00000266589 PRKCQQ04759 706 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 GAS6Q14393 721 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 CLCA4Q14CN2 919 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 UBXN2BQ14CS0 331 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 TLR1Q15399 786 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 CYP2A13Q16696 494 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 PAGE2BQ5JRK9 111 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 PRMT9Q6P2P2 845 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 SLC2A7Q6PXP3 512 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 NXPE4Q6UWF7 544 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 RD3Q7Z3Z2 195 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 SYNPOQ8N3V7 929 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 MINDY1Q8N5J2 469 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 HUS1BQ8NHY5 278 aa11.16□□□□□ -0.62
SCAF11-201ENST00000266589 SLC26A7Q8TE54 656 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms