RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TMEM98Q9Y2Y6 226 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 PRORSD1PA6NEY8 169 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.64□□□□□ -0.23
CDH3-201ENST00000264012 S1PR4O95977 384 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 OAS1P00973 400 aaKnown RBP13.64□□□□□ -0.23
CDH3-201ENST00000264012 SRPRAP08240 638 aaKnown RBP13.64□□□□□ -0.23
CDH3-201ENST00000264012 PCDH1Q08174 1060 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 MERTKQ12866 999 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 ARMC3Q5W041 872 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 GPR151Q8TDV0 419 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 TOP1MTQ969P6 601 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 NEK6Q9HC98 313 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 NKX1-2Q9UD57 310 aaPredicted RBP13.64□□□□□ -0.23
CDH3-201ENST00000264012 KCNK6Q9Y257 313 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 DGKBQ9Y6T7 804 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 M0QZQ0 153 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 WBP4O75554 376 aaKnown RBP13.64□□□□□ -0.23
CDH3-201ENST00000264012 H6PDO95479 791 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 ITGB1P05556 798 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 SLC35E2BP0CK96 405 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 NR4A1P22736 598 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 RAB30Q15771 203 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 TECRLQ5HYJ1 363 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 TMIGD1Q6UXZ0 262 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 PRR23BQ6ZRT6 265 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 ART5Q96L15 291 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 COL21A1Q96P44 957 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 COQ6Q9Y2Z9 468 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 PRKAB1Q9Y478 270 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 MYH3P11055 1940 aa13.64□□□□□ -0.23
CDH3-201ENST00000264012 TIAM2Q8IVF5 1701 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 PDLIM1O00151 329 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 GMFGO60234 142 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 TMEM115Q12893 351 aaPredicted RBP13.63□□□□□ -0.23
CDH3-201ENST00000264012 STEAP4Q687X5 459 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 P2RY8Q86VZ1 359 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 JAZF1Q86VZ6 243 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 SLC30A8Q8IWU4 369 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 CLEC4MQ9H2X3 399 aaPredicted RBP13.63□□□□□ -0.23
CDH3-201ENST00000264012 IKZF2Q9UKS7 526 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 AP2A2O94973 939 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 ANXA8P13928 327 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 HOXB2P14652 356 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 RPS6KA3P51812 740 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 DGKEP52429 567 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 NIPAL4Q0D2K0 466 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 DUOXA1Q1HG43 343 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 RABL3Q5HYI8 236 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 TRIM74Q86UV6 250 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 NATD1Q8N6N6 113 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 TMEM74Q96NL1 305 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 MKS1Q9NXB0 559 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 ELOVL2Q9NXB9 296 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 ACTR3BQ9P1U1 418 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 CCDC182A6NF36 153 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 XKRYO14609 159 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 SNPHO15079 494 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 CHST10O43529 356 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 CD1DP15813 335 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 IL12AP29459 219 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 CLCN4P51793 760 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 PSMD4P55036 377 aaKnown RBP13.63□□□□□ -0.23
CDH3-201ENST00000264012 DSTNP60981 165 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 GRM2Q14416 872 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 KCTD8Q6ZWB6 473 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 RTP4Q96DX8 246 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 RANBP9Q96S59 729 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 CD320Q9NPF0 282 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 IL1RAPQ9NPH3 570 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 MARCH4Q9P2E8 410 aaPredicted RBP13.63□□□□□ -0.23
CDH3-201ENST00000264012 A0A0J9YVX5 310 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 DUXAA6NLW8 204 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 KMOO15229 486 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 PIK3CBP42338 1070 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 TARDBPQ13148 414 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDH3-201ENST00000264012 GANABQ14697 944 aaKnown RBP13.63□□□□□ -0.23
CDH3-201ENST00000264012 FAM91A1Q658Y4 838 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 PM20D1Q6GTS8 502 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 CMTR2Q8IYT2 770 aaKnown RBP13.63□□□□□ -0.23
CDH3-201ENST00000264012 OR10H5Q8NGA6 315 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 CHCHD6Q9BRQ6 235 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 BTBD1Q9H0C5 482 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 OR51B5Q9H339 312 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 ANKHQ9HCJ1 492 aa13.63□□□□□ -0.23
CDH3-201ENST00000264012 NDUFS4O43181 175 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 OPN1SWP03999 348 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 ALPPP05187 535 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 PGGT1BP53609 377 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 RHDQ02161 417 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 ZNF805Q5CZA5 627 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 PLEKHS1Q5SXH7 462 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDH3-201ENST00000264012 TREML1Q86YW5 311 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 CEP97Q8IW35 865 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 SLC5A11Q8WWX8 675 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 PPP1R14BQ96C90 147 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 MS4A4AQ96JQ5 239 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 ZNF382Q96SR6 550 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 YIPF4Q9BSR8 244 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 POLR2J3Q9H1A7 115 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms