RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SDR16C5Q8N3Y7 309 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 OR2A1Q8NGT9 310 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 PIWIL2Q8TC59 973 aaKnown RBP9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 SMPDL3AQ92484 453 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 RSC1A1Q92681 617 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 MTFMTQ96DP5 389 aaKnown RBP9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 ZNF382Q96SR6 550 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 MIPEPQ99797 713 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 TRMOQ9BU70 441 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 ACTR8Q9H981 624 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 KCNK13Q9HB14 408 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 EML4Q9HC35 981 aaKnown RBP9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 RXFP3Q9NSD7 469 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 LHX6Q9UPM6 363 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 BTRCQ9Y297 605 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 BTBD3Q9Y2F9 522 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 TRAF6Q9Y4K3 522 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 PCDHGA5Q9Y5G8 931 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 OTOGLQ3ZCN5 2332 aa9.4□□□□□ -0.9
SNRNP40-201ENST00000263694 EP300Q09472 2414 aaPredicted RBP9.4□□□□□ -0.91
SNRNP40-201ENST00000263694 ASCC3Q8N3C0 2202 aaKnown RBP9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 LY6G6EA0A0G2JKS1 128 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 ZNF195O14628 629 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 AZIN1O14977 448 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 SIGLEC6O43699 453 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 ESRRBO95718 433 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 MLYCDO95822 493 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 OTCP00480 354 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 CAPN1P07384 714 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 RETP07949 1114 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 ALDH4A1P30038 563 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 SHMT2P34897 504 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 HSD17B2P37059 387 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 FASLGP48023 281 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 HTR6P50406 440 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 CCT8P50990 548 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 AQP5P55064 265 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 OR1D5P58170 312 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 CPSF6Q16630 551 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 SGO1Q5FBB7 561 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 XKR6Q5GH73 641 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 NKAIN2Q5VXU1 208 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 LCTLQ6UWM7 567 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 SLCO4C1Q6ZQN7 724 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 PRR23CQ6ZRP0 262 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 TMPRSS11BQ86T26 416 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 RNF175Q8N4F7 328 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 RAB42Q8N4Z0 105 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 Q8N9G6 341 aaPredicted RBP9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 ZNF740Q8NDX6 193 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 BCAS4Q8TDM0 211 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 SETD7Q8WTS6 366 aaKnown RBP9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 HBEGFQ99075 208 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 SLC38A3Q99624 504 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 EBF4Q9BQW3 602 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 NTMT1Q9BV86 223 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 NUF2Q9BZD4 464 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 KLHL25Q9H0H3 589 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 SPNS1Q9H2V7 528 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 FARSBQ9NSD9 589 aaKnown RBP9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 NLGN3Q9NZ94 848 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 LRIT1Q9P2V4 623 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 HAO1Q9UJM8 370 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 DYRK1BQ9Y463 629 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 KCNE2Q9Y6J6 123 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 U3KQA8 63 aa9.39□□□□□ -0.91
SNRNP40-201ENST00000263694 IGKV1-8A0A0C4DH67 115 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 A0A0G2JND7 137 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 GOLGA8QA0A0J9YX86 632 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 PIPSLA2A3N6 862 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 GSAPA4D1B5 854 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 GOLGA8OA6NCC3 632 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 ZNF839A8K0R7 811 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 RHPN2P1A8MT19 583 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 GOLGA8NF8WBI6 632 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 H7BY64 318 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 MATN2O00339 956 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 DFNA5O60443 496 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 PRAMEF10O60809 474 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 CRCPO75575 148 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 WFS1O76024 890 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 CLDN9O95484 217 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 FAM107AO95990 144 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 HGFP14210 728 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 GNAZP19086 355 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 PPM1FP49593 454 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 NEK2P51955 445 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 ATXN3P54252 364 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 PKNOX1P55347 436 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 IRF8Q02556 426 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 BTKQ06187 659 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 GALNT1Q10472 559 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 SF1Q15637 639 aaKnown RBP9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 SLC9B1Q4ZJI4 515 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 KIAA1614Q5VZ46 1190 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 KANK2Q63ZY3 851 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 ICE2Q659A1 982 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 ADNP2Q6IQ32 1131 aa9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 METTL2BQ6P1Q9 378 aaKnown RBP9.38□□□□□ -0.91
SNRNP40-201ENST00000263694 SPATA21Q7Z572 469 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms