RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 TMLHEQ9NVH6 421 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 STMN3Q9NZ72 180 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 TRAPPC4Q9Y296 219 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 CCL27Q9Y4X3 112 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 PCDHGB2Q9Y5G2 931 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 CTDSP2O14595 271 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 OR1I1O60431 355 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 ERN1O75460 977 aaKnown RBP14.58□□□□□ -0.08
XRCC1-201ENST00000262887 CCNDBP1O95273 360 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 TRAPPC2P0DI81 140 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 TRAPPC2BP0DI82 140 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 TIE1P35590 1138 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 PBX3P40426 434 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 HNF4AP41235 474 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 SLC19A1P41440 591 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 Q5BKY6 102 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 ARMC4Q5T2S8 1044 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 TMEM132CQ8N3T6 1108 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 FLCNQ8NFG4 579 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 C1orf74Q96LT6 269 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 SERPINB11Q96P15 392 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 RTP3Q9BQQ7 232 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 AMBNQ9NP70 447 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 TMEM248Q9NWD8 314 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 RIMKLBQ9ULI2 386 aa14.58□□□□□ -0.08
XRCC1-201ENST00000262887 TNPO3Q9Y5L0 923 aaKnown RBP14.58□□□□□ -0.08
XRCC1-201ENST00000262887 MEIOCA2RUB1 952 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 SLITRK5O94991 958 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 FABP3P05413 133 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 CDK1P06493 297 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 MSL3P1P0C860 447 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 AFF1P51825 1210 aaKnown RBP14.57□□□□□ -0.08
XRCC1-201ENST00000262887 ZNF140P52738 457 aaPredicted RBP14.57□□□□□ -0.08
XRCC1-201ENST00000262887 CAMK2GQ13555 558 aaPredicted RBP14.57□□□□□ -0.08
XRCC1-201ENST00000262887 ARMCX4Q5H9R4 360 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 FAM171A1Q5VUB5 890 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 CCDC28AQ8IWP9 274 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 ST13P5Q8NFI4 369 aaPredicted RBP14.57□□□□□ -0.08
XRCC1-201ENST00000262887 OR6J1Q8NGC5 347 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 CDCA5Q96FF9 252 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 ELP3Q9H9T3 547 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 PRDM5Q9NQX1 630 aaPredicted RBP14.57□□□□□ -0.08
XRCC1-201ENST00000262887 FNDC3AQ9Y2H6 1198 aaKnown RBP14.57□□□□□ -0.08
XRCC1-201ENST00000262887 PCDHGA6Q9Y5G7 932 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 PPP2R3BQ9Y5P8 575 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 SNX8Q9Y5X2 465 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 B8ZZF3 427 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 EPOP01588 193 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 SMIM10L2AP0DMW4 78 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 SMIM10L2BP0DMW5 78 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 RGS6P49758 472 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 CACNB2Q08289 660 aaPredicted RBP14.57□□□□□ -0.08
XRCC1-201ENST00000262887 PCBP2Q15366 365 aaKnown RBP eCLIP14.57□□□□□ -0.083e-6■■■■■ 29.5
XRCC1-201ENST00000262887 KIAA1841Q6NSI8 718 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 LYPD8Q6UX82 237 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 GLT6D1Q7Z4J2 308 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 SCD5Q86SK9 330 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 ANKRD46Q86W74 232 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 CYP4Z2PQ8N1L4 340 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 RIPOR3Q96MK2 946 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 NMUR1Q9HB89 426 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 CPA4Q9UI42 421 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 PCM1Q15154 2024 aa14.57□□□□□ -0.08
XRCC1-201ENST00000262887 CASTOR2A6NHX0 329 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 VIPP01282 170 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 GNPDA1P46926 289 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 RFX2P48378 723 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 LIMK1P53667 647 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 GPLD1P80108 840 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 IL10RBQ08334 325 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 ABHD18Q0P651 414 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 PARP15Q460N3 678 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 PAN2Q504Q3 1202 aaKnown RBP14.56□□□□□ -0.08
XRCC1-201ENST00000262887 TIGD5Q53EQ6 642 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 CTSL3PQ5NE16 218 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 PSAPL1Q6NUJ1 521 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 SUSD1Q6UWL2 747 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 GGHQ92820 318 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 HRASLS5Q96KN8 279 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 TRNT1Q96Q11 434 aaKnown RBP14.56□□□□□ -0.08
XRCC1-201ENST00000262887 C12orf4Q9NQ89 552 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 FARSBQ9NSD9 589 aaKnown RBP14.56□□□□□ -0.08
XRCC1-201ENST00000262887 PLCXD1Q9NUJ7 323 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.56□□□□□ -0.08
XRCC1-201ENST00000262887 CFL2Q9Y281 166 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 VPS9D1Q9Y2B5 631 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 CLCA1A8K7I4 914 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 WNT9AO14904 365 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 KIAA0513O60268 411 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 RAMP2O60895 175 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 THP07101 528 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 IL7P13232 177 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 POLR2CP19387 275 aaPredicted RBP14.56□□□□□ -0.08
XRCC1-201ENST00000262887 VLDLRP98155 873 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 SLAMF1Q13291 335 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 SGO1Q5FBB7 561 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 GPR153Q6NV75 609 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 FAM171BQ6P995 826 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 PIANPQ8IYJ0 282 aa14.56□□□□□ -0.08
XRCC1-201ENST00000262887 DNAJC22Q8N4W6 341 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms