RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 ZDHHC1Q8WTX9 485 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 SPNS1Q9H2V7 528 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 SPHK1Q9NYA1 384 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 GIMAP2Q9UG22 337 aa17.14■□□□□ 0.33
CCDC115-201ENST00000259229 LAMA1P25391 3075 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 SNRNP200O75643 2136 aaKnown RBP17.13■□□□□ 0.33
CCDC115-201ENST00000259229 KNL1Q8NG31 2342 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 FAM86C2PA6NEL3 165 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 B4DGG1 531 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 LMO7DNF2Z398 122 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 CLGNO14967 610 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 NOBOXO60393 691 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 GNSP15586 552 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 ZRSR2Q15696 482 aaKnown RBP17.13■□□□□ 0.33
CCDC115-201ENST00000259229 SPDYAQ5MJ70 313 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 ATG9BQ674R7 924 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 ACAD11Q709F0 780 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 CHSY3Q70JA7 882 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 C17orf82Q86X59 251 aaPredicted RBP17.13■□□□□ 0.33
CCDC115-201ENST00000259229 GKN2Q86XP6 184 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 MYLK4Q86YV6 388 aaPredicted RBP17.13■□□□□ 0.33
CCDC115-201ENST00000259229 SYT12Q8IV01 421 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 ADGRF3Q8IZF5 1079 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 RAB42Q8N4Z0 105 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 OR2A1Q8NGT9 310 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 WDR20Q8TBZ3 569 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 ZFPM2Q8WW38 1151 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 SLC5A11Q8WWX8 675 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 ACAT2Q9BWD1 397 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 EHD1Q9H4M9 534 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 AKTIPQ9H8T0 292 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 SAR1AQ9NR31 198 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 SUSD2Q9UGT4 822 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 DYRK1BQ9Y463 629 aa17.13■□□□□ 0.33
CCDC115-201ENST00000259229 IGKV1-8A0A0C4DH67 115 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 BTN3A3O00478 584 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 CHEK2O96017 543 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 GIMD1P0DJR0 217 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 CDH1P12830 882 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 SLC2A4P14672 509 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 SHMT2P34897 504 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 ZNF423Q2M1K9 1284 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 GALNTL6Q49A17 601 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 METTL21CQ5VZV1 264 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 FAM91A1Q658Y4 838 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 ADNP2Q6IQ32 1131 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 IL27RAQ6UWB1 636 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 NXPE4Q6UWF7 544 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 CEP68Q76N32 757 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 TRIM46Q7Z4K8 759 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 AMIGO1Q86WK6 493 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 FAM129CQ86XR2 697 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 CEP70Q8NHQ1 597 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 FLVCR1-AS1Q8TAF5 88 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 PIGKQ92643 395 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 PTCD3Q96EY7 689 aaKnown RBP17.12■□□□□ 0.33
CCDC115-201ENST00000259229 MAGEB10Q96LZ2 347 aaPredicted RBP17.12■□□□□ 0.33
CCDC115-201ENST00000259229 HAUS8Q9BT25 410 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 CUEDC1Q9NWM3 386 aaPredicted RBP17.12■□□□□ 0.33
CCDC115-201ENST00000259229 OR6C2Q9NZP2 312 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 ADAMTS9Q9P2N4 1935 aa17.12■□□□□ 0.33
CCDC115-201ENST00000259229 H0YIV9 168 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 UBOX5O94941 541 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 PDYNP01213 254 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 VIPP01282 170 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 ALDOCP09972 364 aaKnown RBP17.11■□□□□ 0.33
CCDC115-201ENST00000259229 C1GALT1C1LP0DN25 315 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 HNF4AP41235 474 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 RXRGP48443 463 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 MAZP56270 477 aaKnown RBP17.11■□□□□ 0.33
CCDC115-201ENST00000259229 UBAP2LQ14157 1087 aaKnown RBP17.11■□□□□ 0.33
CCDC115-201ENST00000259229 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.11■□□□□ 0.33
CCDC115-201ENST00000259229 THEMIS2Q5TEJ8 643 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 TRIM48Q8IWZ4 208 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 SDR16C5Q8N3Y7 309 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 OR4E2Q8NGC2 313 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 LCN9Q8WX39 176 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 ELF4Q99607 663 aaPredicted RBP17.11■□□□□ 0.33
CCDC115-201ENST00000259229 CCT7Q99832 543 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 CCDC106Q9BWC9 280 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 PCBD2Q9H0N5 130 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 FSCN3Q9NQT6 498 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 GEMIN8Q9NWZ8 242 aaKnown RBP17.11■□□□□ 0.33
CCDC115-201ENST00000259229 ARMCX1Q9P291 453 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 ZFP69BQ9UJL9 534 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 PCDHGA2Q9Y5H1 932 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 SDK1Q7Z5N4 2213 aa17.11■□□□□ 0.33
CCDC115-201ENST00000259229 SERTM1A2A2V5 107 aa17.1■□□□□ 0.33
CCDC115-201ENST00000259229 CAPN14A8MX76 684 aa17.1■□□□□ 0.33
CCDC115-201ENST00000259229 KDM1AO60341 852 aa17.1■□□□□ 0.33
CCDC115-201ENST00000259229 ULK1O75385 1050 aa17.1■□□□□ 0.33
CCDC115-201ENST00000259229 CHRM5P08912 532 aaPredicted RBP17.1■□□□□ 0.33
CCDC115-201ENST00000259229 HOXD12P35452 270 aa17.1■□□□□ 0.33
CCDC115-201ENST00000259229 FASLGP48023 281 aa17.1■□□□□ 0.33
CCDC115-201ENST00000259229 BNIP3Q12983 259 aa17.1■□□□□ 0.33
CCDC115-201ENST00000259229 SLBPQ14493 270 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCDC115-201ENST00000259229 DEFB133Q30KQ1 61 aa17.1■□□□□ 0.33
CCDC115-201ENST00000259229 FRG2Q64ET8 278 aa17.1■□□□□ 0.33
CCDC115-201ENST00000259229 ICE2Q659A1 982 aa17.1■□□□□ 0.33
CCDC115-201ENST00000259229 NXNQ6DKJ4 435 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms