RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 OR4K1Q8NGD4 311 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 SCAMP4Q969E2 229 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 LGALS12Q96DT0 336 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 APIPQ96GX9 242 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 ZFYVE19Q96K21 471 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 AMBRA1Q9C0C7 1298 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 TPT1P8Q9HAU6 139 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 HEBP1Q9NRV9 189 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 TMCC3Q9ULS5 477 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 ERGIC3Q9Y282 383 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 TCRBV5S2A0A599 114 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 KRBA1A5PL33 1030 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 EFCAB10A6NFE3 127 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 PDZK1P1A8MUH7 402 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 M0R129 80 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 CCNDBP1O95273 360 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 PRLP01236 227 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 GSTM1P09488 218 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 GTF2E2P29084 291 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 RPP38P78345 283 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 MXD1Q05195 221 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 CLCA4Q14CN2 919 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ACOX1Q15067 660 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 CTU2Q2VPK5 515 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 SPATS1Q496A3 300 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 XKR7Q5GH72 579 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ZNF648Q5T619 568 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 C6orf183Q5T699 404 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 AFMIDQ63HM1 303 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 RGMBQ6NW40 437 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 FAM180BQ6P0A1 224 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 TMC5Q6UXY8 1006 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 NCCRP1Q6ZVX7 275 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 BTLAQ7Z6A9 289 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 DNAJB7Q7Z6W7 309 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 GALNT7Q86SF2 657 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 CYP4Z1Q86W10 505 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 GATAD2AQ86YP4 633 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 RBM12BQ8IXT5 1001 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 CMTM8Q8IZV2 173 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 APCDD1Q8J025 514 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 C1orf52Q8N6N3 182 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 ZNF366Q8N895 744 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 C11orf65Q8NCR3 313 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ZNF548Q8NEK5 533 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 BPIFB1Q8TDL5 484 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 MYDGFQ969H8 173 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 DUS3LQ96G46 650 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 SH3YL1Q96HL8 342 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 IL4I1Q96RQ9 567 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 KCNS3Q9BQ31 491 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 DUSP26Q9BV47 211 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 NDEL1Q9GZM8 345 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 TLR9Q9NR96 1032 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ABCB8Q9NUT2 735 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 RHCGQ9UBD6 479 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 TRPC4Q9UBN4 977 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 SLC25A13Q9UJS0 675 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 FZD4Q9ULV1 537 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ABCG2Q9UNQ0 655 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 GPC6Q9Y625 555 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 ANKDD1BA6NHY2 528 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 LOC110117498-PIK3R3F6TDL0 507 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 BPIP17213 487 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 PRPS1L1P21108 318 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 FPR1P21462 350 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 KDELR2P33947 212 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 GPC1P35052 558 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 IDUAP35475 653 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 MAGEA10P43363 369 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 SUOXP51687 545 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 CLCN4P51793 760 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 PRKAG1P54619 331 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ARF5P84085 180 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ELP6Q0PNE2 266 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 SREBF2Q12772 1141 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 COL9A2Q14055 689 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 DSC3Q14574 896 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 PCBP2Q15366 365 aaKnown RBP eCLIP4.61□□□□□ -1.67
USP44-201ENST00000258499 TAB1Q15750 504 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 NKG7Q16617 165 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 HIST2H2ACQ16777 129 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 ATP13A5Q4VNC0 1218 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 HIST2H2AA3Q6FI13 130 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 NOXRED1Q6NXP6 359 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ELMSAN1Q6PJG2 1045 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 SBSNQ6UWP8 590 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 RSPO2Q6UXX9 243 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 RRM2BQ7LG56 351 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 TMEM173Q86WV6 379 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 IFNL1Q8IU54 200 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ALDH16A1Q8IZ83 802 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 SLC34A3Q8N130 599 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 NXPE1Q8N323 547 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 ELMOD1Q8N336 334 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 DPP10Q8N608 796 aa4.61□□□□□ -1.67
USP44-201ENST00000258499 WDR36Q8NI36 951 aaKnown RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 VANGL1Q8TAA9 524 aaPredicted RBP4.61□□□□□ -1.67
USP44-201ENST00000258499 CSGALNACT1Q8TDX6 532 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms