RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 ITGA1P56199 1179 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 POU4F1Q01851 419 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 TAP2Q03519 686 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 ABHD18Q0P651 414 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 TSTA3Q13630 321 aaPredicted RBP8.19□□□□□ -1.1
TMEM258-201ENST00000257262 EFTUD2Q15029 972 aaKnown RBP eCLIP8.19□□□□□ -1.1
TMEM258-201ENST00000257262 PHKG1Q16816 387 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 INO80CQ6PI98 192 aaPredicted RBP8.19□□□□□ -1.1
TMEM258-201ENST00000257262 FIGLAQ6QHK4 219 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 MBOAT1Q6ZNC8 495 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 CEP128Q6ZU80 1094 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 GPR155Q7Z3F1 870 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 RELL1Q8IUW5 271 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 IFT20Q8IY31 132 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 SYTL1Q8IYJ3 562 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 NKAPQ8N5F7 415 aaKnown RBP8.19□□□□□ -1.1
TMEM258-201ENST00000257262 ESX1Q8N693 406 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 OR2L3Q8NG85 312 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 SMPDL3AQ92484 453 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 N4BP2L2Q92802 583 aaPredicted RBP8.19□□□□□ -1.1
TMEM258-201ENST00000257262 CLIP3Q96DZ5 547 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 MRRFQ96E11 262 aaKnown RBP8.19□□□□□ -1.1
TMEM258-201ENST00000257262 HIST1H2AHQ96KK5 128 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 CCDC138Q96M89 665 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 FMO2Q99518 471 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 CPNE1Q99829 537 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 HIST1H2AJQ99878 128 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 RHOXF2Q9BQY4 288 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 H2AFJQ9BTM1 129 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 FAM129AQ9BZQ8 928 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 CHRNA10Q9GZZ6 450 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 ATG10Q9H0Y0 220 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 CDC42EP4Q9H3Q1 356 aaKnown RBP8.19□□□□□ -1.1
TMEM258-201ENST00000257262 POPDC3Q9HBV1 291 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 GPAMQ9HCL2 828 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 LHX9Q9NQ69 397 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 INTS7Q9NVH2 962 aaKnown RBP8.19□□□□□ -1.1
TMEM258-201ENST00000257262 STOX2Q9P2F5 926 aaPredicted RBP8.19□□□□□ -1.1
TMEM258-201ENST00000257262 PADI1Q9ULC6 663 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 NFU1Q9UMS0 254 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 PLCL2Q9UPR0 1127 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 PKD1L2Q7Z442 2459 aa8.19□□□□□ -1.1
TMEM258-201ENST00000257262 SNRNP200O75643 2136 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 CELSR3Q9NYQ7 3312 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 ZNF839A8K0R7 811 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 CDC7O00311 574 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 ZNF749O43361 778 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 NRP2O60462 931 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 CPNE3O75131 537 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 OR2B3O76000 313 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 FKBP9O95302 570 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 GUCA1CO95843 209 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 KLK3P07288 261 aaPredicted RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 STMN1P16949 149 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 TCN2P20062 427 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 F8A1P23610 371 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 PHBP35232 272 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 DLSTP36957 453 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 CYP4F2P78329 520 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 PRDX1Q06830 199 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 ILF2Q12905 390 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 GPS2Q13227 327 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 SP140Q13342 867 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 USP10Q14694 798 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 ZXDCQ2QGD7 858 aaPredicted RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 ZC3H12BQ5HYM0 836 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 ICE2Q659A1 982 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 FBXO42Q6P3S6 717 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 AGTRAPQ6RW13 159 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 MCATQ8IVS2 390 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 GPR135Q8IZ08 494 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 SPATA6LQ8N4H0 392 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 SNRNP27Q8WVK2 155 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 KIAA1143Q96AT1 154 aaPredicted RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 GPR22Q99680 433 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 DPH7Q9BTV6 452 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 TRIM54Q9BYV2 358 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 UNKQ9C0B0 810 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 SLC7A5P2Q9GIP4 190 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 TSPYL1Q9H0U9 437 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 ACTR5Q9H9F9 607 aaPredicted RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 L2HGDHQ9H9P8 463 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 GPN2Q9H9Y4 310 aaPredicted RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 SLC6A20Q9NP91 592 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 MRPS30Q9NP92 439 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 EURLQ9NYK6 297 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 TAC3Q9UHF0 121 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 IL17BQ9UHF5 180 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 MRPS18BQ9Y676 258 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 LAMA5O15230 3695 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 URB1O60287 2271 aaKnown RBP8.18□□□□□ -1.1
TMEM258-201ENST00000257262 FAM208BQ5VWN6 2430 aa8.18□□□□□ -1.1
TMEM258-201ENST00000257262 IGKV1-8A0A0C4DH67 115 aa8.17□□□□□ -1.1
TMEM258-201ENST00000257262 A0A0J9YVX5 310 aa8.17□□□□□ -1.1
TMEM258-201ENST00000257262 OR2A25A4D2G3 310 aa8.17□□□□□ -1.1
TMEM258-201ENST00000257262 PABPN1LA6NDY0 278 aaKnown RBP8.17□□□□□ -1.1
TMEM258-201ENST00000257262 NPEPPSL1A6NEC2 478 aa8.17□□□□□ -1.1
TMEM258-201ENST00000257262 MEN1O00255 615 aa8.17□□□□□ -1.1
TMEM258-201ENST00000257262 TERTO14746 1132 aaKnown RBP8.17□□□□□ -1.1
TMEM258-201ENST00000257262 PHGDHO43175 533 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms