RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SERPINI1Q99574 410 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 TIMM29Q9BSF4 260 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 SLC25A23Q9BV35 468 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 TPSD1Q9BZJ3 242 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 BRINP2Q9C0B6 783 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 RMI1Q9H9A7 625 aa18.29■□□□□ 0.52
TRIM47-201ENST00000254816 NRP2O60462 931 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 SEC22BO75396 215 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 NPPBP16860 134 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 IL12AP29459 219 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 ZFP36L2P47974 494 aaKnown RBP18.28■□□□□ 0.52
TRIM47-201ENST00000254816 DMPKQ09013 629 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 CATSPEREQ5SY80 951 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 ADNP2Q6IQ32 1131 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 GCNT7Q6ZNI0 430 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 RNF165Q6ZSG1 346 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 TMPRSS11BQ86T26 416 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 PGAM4Q8N0Y7 254 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 OR1E3Q8WZA6 343 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 TSACCQ96A04 125 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-201ENST00000254816 FBXL21Q9UKT6 434 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 ACSL5Q9ULC5 683 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 PNMA8BQ9ULN7 279 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-201ENST00000254816 LRP4O75096 1905 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 MRASO14807 208 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 TCN1P20061 433 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-201ENST00000254816 KELP23276 732 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 MRPS22P82650 360 aaKnown RBP18.28■□□□□ 0.52
TRIM47-201ENST00000254816 MS4A2Q01362 244 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 PRKCQQ04759 706 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 LRP8Q14114 963 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 FLOT2Q14254 428 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 CLCA4Q14CN2 919 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 FRG2Q64ET8 278 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 RETREG3Q86VR2 466 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 PDSS2Q86YH6 399 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 FAM160A2Q8N612 972 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-201ENST00000254816 FAM156AQ8NDB6 213 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 DENND6BQ8NEG7 585 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 FRG2BQ96QU4 278 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 FERD3LQ96RJ6 166 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 SGPP1Q9BX95 441 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 LRTM1Q9HBL6 345 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 LTB4R2Q9NPC1 389 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 PRDM8Q9NQV8 689 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 IMP3Q9NV31 184 aaKnown RBP18.28■□□□□ 0.52
TRIM47-201ENST00000254816 KCNE2Q9Y6J6 123 aa18.28■□□□□ 0.52
TRIM47-201ENST00000254816 FAM170BA6NMN3 283 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 CHURC1-FNTBB4DL54 471 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 MAP3K13O43283 966 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 SLC22A3O75751 556 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 RSL1D1O76021 490 aaKnown RBP18.27■□□□□ 0.52
TRIM47-201ENST00000254816 IGHV4-34P06331 123 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 AQP4P55087 323 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 KIAA1024LP59773 190 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 DDX39BQ13838 428 aaKnown RBP18.27■□□□□ 0.52
TRIM47-201ENST00000254816 NFATC4Q14934 902 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 PDCD4Q53EL6 469 aaKnown RBP18.27■□□□□ 0.52
TRIM47-201ENST00000254816 THEMIS2Q5TEJ8 643 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 CYP20A1Q6UW02 462 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 TSTD1Q8NFU3 115 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 PROKR1Q8TCW9 393 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 GATA6Q92908 595 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 VPS33AQ96AX1 596 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 MTERF1Q99551 399 aaKnown RBP18.27■□□□□ 0.52
TRIM47-201ENST00000254816 KLHL4Q9C0H6 718 aa18.27■□□□□ 0.52
TRIM47-201ENST00000254816 CCDC177Q9NQR7 707 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-201ENST00000254816 USP34Q70CQ2 3546 aa18.27■□□□□ 0.51
TRIM47-201ENST00000254816 PRAMEF33A0A0G2JMD5 474 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 OR52A4PA6NMU1 304 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 PXNP49023 591 aaPredicted RBP18.26■□□□□ 0.51
TRIM47-201ENST00000254816 YBX1P67809 324 aaKnown RBP18.26■□□□□ 0.51
TRIM47-201ENST00000254816 BLOC1S3Q6QNY0 202 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 WDR20Q8TBZ3 569 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 SCARF2Q96GP6 870 aaPredicted RBP18.26■□□□□ 0.51
TRIM47-201ENST00000254816 ACAT2Q9BWD1 397 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 GPR174Q9BXC1 333 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 TRIT1Q9H3H1 467 aaKnown RBP18.26■□□□□ 0.51
TRIM47-201ENST00000254816 ACTL8Q9H568 366 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 SCOCQ9UIL1 159 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 PDZK1P1A8MUH7 402 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 UGDHO60701 494 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 MEF2AQ02078 507 aaPredicted RBP18.26■□□□□ 0.51
TRIM47-201ENST00000254816 LRRC32Q14392 662 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 PTGR1Q14914 329 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 GRHL2Q6ISB3 625 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 SLCO4C1Q6ZQN7 724 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 SIX5Q8N196 739 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 WDR92Q96MX6 357 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 OR2M4Q96R27 311 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 IL1RL2Q9HB29 575 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 SLC52A3Q9NQ40 469 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 C1orf109Q9NX04 203 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 DYRK1BQ9Y463 629 aa18.26■□□□□ 0.51
TRIM47-201ENST00000254816 SH3BGRLO75368 114 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 ZCCHC18P0CG32 403 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 IDSP22304 550 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 AK4P27144 223 aaPredicted RBP18.25■□□□□ 0.51
TRIM47-201ENST00000254816 AKT2P31751 481 aa18.25■□□□□ 0.51
TRIM47-201ENST00000254816 LIX1Q8N485 282 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms