RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 KLHL12Q53G59 568 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 CTSL3PQ5NE16 218 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 TPRG1LQ5T0D9 272 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SLC8B1Q6J4K2 584 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SLC22A16Q86VW1 577 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 CPA6Q8N4T0 437 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 EDEM1Q92611 657 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 LINGO1Q96FE5 620 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 ALPK1Q96QP1 1244 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SEMA3CQ99985 751 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SPON2Q9BUD6 331 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 EXOSC4Q9NPD3 245 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 KRCC1Q9NPI7 259 aaPredicted RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 ASIC5Q9NY37 505 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 EHD3Q9NZN3 535 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 KLHL42Q9P2K6 505 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 PCDHGA11Q9Y5H2 935 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 C2orf16Q68DN1 1984 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SH3D21A4FU49 640 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 J3QRK9 145 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 RFXANKO14593 260 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 NBNO60934 754 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 TMCC2O75069 709 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 ABLIM3O94929 683 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 KLKB1P03952 638 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 EBLN1P0CF75 366 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 PRKAR1AP10644 381 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 YWHAQP27348 245 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 RPL38P63173 70 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 CRHR2Q13324 411 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SLC9A5Q14940 896 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 PROX2Q3B8N5 592 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SIRPB2Q5JXA9 342 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 NEK5Q6P3R8 708 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 GLB1LQ6UWU2 654 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 DCP2Q8IU60 420 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF557Q8N988 423 aaPredicted RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 MDGA1Q8NFP4 955 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 RHOXF1Q8NHV9 184 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 WBP2Q969T9 261 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 FBXL8Q96CD0 374 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 LRCH3Q96II8 777 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SLC30A3Q99726 388 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 CORO1BQ9BR76 489 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 COPS4Q9BT78 406 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 LHPPQ9H008 270 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 NTN4Q9HB63 628 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 PRDM8Q9NQV8 689 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 NLE1Q9NVX2 485 aaPredicted RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 FAM120CQ9NX05 1096 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 MRPL39Q9NYK5 338 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 TRPM5Q9NZQ8 1165 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 ANGPT4Q9Y264 503 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 MAN2B2Q9Y2E5 1009 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 POLR3HQ9Y535 204 aaPredicted RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 C10orf142B7Z368 130 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 PPP6CO00743 305 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 CREG1O75629 220 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 ALPLP05186 524 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 RHOCP08134 193 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 PRPS1L1P21108 318 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 KIR3DL1P43629 444 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 GPR15P49685 360 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 CLCN7P51798 805 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 FOXA1P55317 472 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 GTF2H2Q13888 395 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 STARD3Q14849 445 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 PCBP2Q15366 365 aaKnown RBP eCLIP4.04□□□□□ -1.762e-6■■■■□ 23.1
UBE4A-201ENST00000252108 NOMO2Q5JPE7 1267 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 C6orf136Q5SQH8 315 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF691Q5VV52 312 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 GTF2H2CQ6P1K8 395 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 ISLR2Q6UXK2 745 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 MSRB3Q8IXL7 192 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 PNPLA1Q8N8W4 532 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SIMC1Q8NDZ2 872 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 UBTD2Q8WUN7 234 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 TANKQ92844 425 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 FBXO32Q969P5 355 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 UBE2E3Q969T4 207 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 PPM1MQ96MI6 270 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 DSN1Q9H410 356 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 TRPV5Q9NQA5 729 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 RPRD1BQ9NQG5 326 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 KCTD5Q9NXV2 234 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 VPS4AQ9UN37 437 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SPO11Q9Y5K1 396 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 OR6C75A6NL08 312 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 FAM47E-STBD1D6RA91 191 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 MYL12BO14950 172 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 ECI2O75521 394 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 C1RP00736 705 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 OR56A5P0C7T3 313 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 CAPN3P20807 821 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 PSMA1P25786 263 aaKnown RBP4.04□□□□□ -1.76
UBE4A-201ENST00000252108 OR1E1P30953 314 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 TALDO1P37837 337 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 OPRL1P41146 370 aa4.04□□□□□ -1.76
UBE4A-201ENST00000252108 SLC15A1P46059 708 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms