RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ZCCHC8Q6NZY4 707 aaKnown RBP12.5□□□□□ -0.41
LSM8-201ENST00000249299 DUS1LQ6P1R4 473 aaKnown RBP12.5□□□□□ -0.41
LSM8-201ENST00000249299 SLCO4C1Q6ZQN7 724 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 C17orf64Q86WR6 236 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 ARL14Q8N4G2 192 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 LMNTD1Q8N9Z9 388 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 LINC01555Q8NAE3 123 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 OR4F6Q8NGB9 312 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 OR52B6Q8NGF0 335 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 SAP25Q8TEE9 199 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 ZNF473Q8WTR7 871 aaKnown RBP12.5□□□□□ -0.41
LSM8-201ENST00000249299 SLC5A11Q8WWX8 675 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 PYCR2Q96C36 320 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 REPS1Q96D71 796 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 PTCD3Q96EY7 689 aaKnown RBP12.5□□□□□ -0.41
LSM8-201ENST00000249299 ELAC2Q9BQ52 826 aaKnown RBP12.5□□□□□ -0.41
LSM8-201ENST00000249299 NT5DC2Q9H857 520 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 PELI2Q9HAT8 420 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 ANKMY1Q9P2S6 941 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 ADGRE2Q9UHX3 823 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 ZNF225Q9UK10 706 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 PPT2Q9UMR5 302 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 SNX6Q9UNH7 406 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 ARL2BPQ9Y2Y0 163 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 PCDHGA11Q9Y5H2 935 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 CEP192Q8TEP8 1941 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 KMT2EQ8IZD2 1858 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 TNRC6BQ9UPQ9 1833 aaKnown RBP12.49□□□□□ -0.41
LSM8-201ENST00000249299 B4DGG1 531 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 NPIPB8E9PQR5 432 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 H0YIV9 168 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 ZNF195O14628 629 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 FOXD2O60548 495 aaPredicted RBP12.49□□□□□ -0.41
LSM8-201ENST00000249299 KRT6AP02538 564 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 KRT6BP04259 564 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 CHRM5P08912 532 aaPredicted RBP12.49□□□□□ -0.41
LSM8-201ENST00000249299 C1GALT1C1LP0DN25 315 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 JUPP14923 745 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 GLB1P16278 677 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 KRT6CP48668 564 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 FASTKQ14296 549 aaKnown RBP12.49□□□□□ -0.41
LSM8-201ENST00000249299 SUZ12Q15022 739 aaKnown RBP12.49□□□□□ -0.41
LSM8-201ENST00000249299 PLCL1Q15111 1095 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 HIST2H2ACQ16777 129 aaPredicted RBP12.49□□□□□ -0.41
LSM8-201ENST00000249299 FBXO48Q5FWF7 155 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 THEMIS2Q5TEJ8 643 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 HIST2H2AA3Q6FI13 130 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 GRHL2Q6ISB3 625 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 CGB2Q6NT52 195 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 LETMD1Q6P1Q0 360 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 EPGNQ6UW88 154 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 NXPE4Q6UWF7 544 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 ZNF438Q7Z4V0 828 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 SYVN1Q86TM6 617 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 ADGRF3Q8IZF5 1079 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 CARFQ8N187 725 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 CCDC197Q8NCU1 140 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 OR4K1Q8NGD4 311 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 OR2A1Q8NGT9 310 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 OR4C6Q8NH72 309 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 METTL6Q8TCB7 284 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 METTL2AQ96IZ6 378 aaKnown RBP12.49□□□□□ -0.41
LSM8-201ENST00000249299 MAELQ96JY0 434 aaKnown RBP12.49□□□□□ -0.41
LSM8-201ENST00000249299 CCDC28BQ9BUN5 200 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 SARGQ9BW04 601 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 RAB33BQ9H082 229 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 FAM107BQ9H098 131 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 GAREM1Q9H706 876 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 MEAF6Q9HAF1 191 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 NPHS2Q9NP85 383 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 EVA1BQ9NVM1 165 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 PNPOQ9NVS9 261 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 UCKL1Q9NWZ5 548 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 DNAJC15Q9Y5T4 150 aa12.49□□□□□ -0.41
LSM8-201ENST00000249299 PIPSLA2A3N6 862 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 C2orf74A8MZ97 194 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 PPP6CO00743 305 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 GIMD1P0DJR0 217 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 HSD3B1P14060 373 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 HSD3B2P26439 372 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 CMPK1P30085 196 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 CCR10P46092 362 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 CCR8P51685 355 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 ARFIP2P53365 341 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 AQP5P55064 265 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 BNIP3Q12983 259 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 CHIT1Q13231 466 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 SMU1Q2TAY7 513 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 INAVAQ3KP66 663 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 XKR6Q5GH73 641 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 ICE2Q659A1 982 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 DBX2Q6ZNG2 339 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 RPS27LQ71UM5 84 aaKnown RBP12.48□□□□□ -0.41
LSM8-201ENST00000249299 TRIM46Q7Z4K8 759 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 OOSP2Q86WS3 158 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 PARP9Q8IXQ6 854 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 CACNA2D3Q8IZS8 1091 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 KRT78Q8N1N4 520 aa12.48□□□□□ -0.41
LSM8-201ENST00000249299 GBP7Q8N8V2 638 aaPredicted RBP12.48□□□□□ -0.41
LSM8-201ENST00000249299 OR4E2Q8NGC2 313 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms