RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ZSCAN9O15535 394 aaPredicted RBP23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 SPTBP11277 2137 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 AGXTP21549 392 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 CCND1P24385 295 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 PHBP35232 272 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 SPRP35270 261 aaPredicted RBP23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 RPS15P62841 145 aaKnown RBP23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 KBTBD12Q3ZCT8 623 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 PRAMEF17Q5VTA0 474 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 ICE2Q659A1 982 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 RHBDD2Q6NTF9 364 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 SPNS2Q8IVW8 549 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 SLC38A9Q8NBW4 561 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 PPFIBP2Q8ND30 876 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 PROKR1Q8TCW9 393 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 FBF1Q8TES7 1133 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 STARD8Q92502 1023 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 C17orf62Q9BQA9 187 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 DPH7Q9BTV6 452 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 ACAT2Q9BWD1 397 aa23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 SPRTNQ9H040 489 aaPredicted RBP23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 CCDC177Q9NQR7 707 aaPredicted RBP23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 STOX2Q9P2F5 926 aaPredicted RBP23.37■■□□□ 1.33
SDF2L1-201ENST00000248958 OR2A25A4D2G3 310 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 ATXN7O15265 892 aaPredicted RBP23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 HCRTR1O43613 425 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 C1QAP02745 245 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 RAB40ALP0C0E4 278 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 HRH2P25021 359 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 ARSFP54793 590 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 RELAQ04206 551 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 THEMIS2Q5TEJ8 643 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 YOD1Q5VVQ6 348 aaPredicted RBP23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 ATL1Q8WXF7 558 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 IFT81Q8WYA0 676 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 TTC9Q92623 222 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 FMO2Q99518 471 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 GPR22Q99680 433 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 NDC1Q9BTX1 674 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 GPAMQ9HCL2 828 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 SNX7Q9UNH6 387 aa23.36■■□□□ 1.33
SDF2L1-201ENST00000248958 ATRXP46100 2492 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 KATNA1O75449 491 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 F8A1P23610 371 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 GRM7Q14831 915 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 TAF1BQ53T94 588 aaPredicted RBP23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 AGTRAPQ6RW13 159 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 TMEM207Q6UWW9 146 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 RNF44Q7L0R7 432 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 PPM1NQ8N819 430 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 TTC29Q8NA56 475 aaPredicted RBP23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 ZNF285Q96NJ3 590 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 ZFYVE21Q9BQ24 234 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 SELENOSQ9BQE4 189 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 PLCD4Q9BRC7 762 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 TXLNGQ9NUQ3 528 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 ARL15Q9NXU5 204 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 MTO1Q9Y2Z2 717 aaKnown RBP23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 ITPR1Q14643 2758 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 ANKRD12Q6UB98 2062 aa23.35■■□□□ 1.33
SDF2L1-201ENST00000248958 HEATR5BQ9P2D3 2071 aa23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 TK2O00142 265 aa23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 PIAS1O75925 651 aa23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 STMN1P16949 149 aa23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 USP10Q14694 798 aaKnown RBP23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 PHKG1Q16816 387 aa23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 FAM199XQ6PEV8 388 aaPredicted RBP23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 ZNF655Q8N720 491 aaPredicted RBP23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 CHST8Q9H2A9 424 aa23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 AKIRIN1Q9H9L7 192 aaPredicted RBP23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 SLC6A20Q9NP91 592 aa23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 FARSAQ9Y285 508 aaKnown RBP23.34■■□□□ 1.33
SDF2L1-201ENST00000248958 CTSVO60911 334 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 CREG1O75629 220 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 CD63P08962 238 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 PTPN4P29074 926 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 PGGT1BP53609 377 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 TBPL1P62380 186 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 CDC20Q12834 499 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 FAM214AQ32MH5 1076 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 PRAMEF13Q5VWM6 474 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 ZNF385CQ66K41 422 aaPredicted RBP23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 ZNF425Q6IV72 752 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 CAPN13Q6MZZ7 669 aaPredicted RBP23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 PAQR7Q86WK9 346 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 CEP97Q8IW35 865 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 IFT20Q8IY31 132 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 FBXL8Q96CD0 374 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 DHRS4Q9BTZ2 278 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 NLNQ9BYT8 704 aa23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 MRPS18BQ9Y676 258 aaKnown RBP23.33■■□□□ 1.33
SDF2L1-201ENST00000248958 A0A0J9YVX5 310 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 C9J4A7 227 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 NKX2-8O15522 239 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 EZRP15311 586 aaKnown RBP23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 CYP4F2P78329 520 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 CDKL1Q00532 357 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 ZNF460Q14592 562 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 FBXO42Q6P3S6 717 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 LCTLQ6UWM7 567 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms