RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 RNF31Q96EP0 1072 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 PDLIM5Q96HC4 596 aaKnown RBP12.26□□□□□ -0.45
VPREB3-201ENST00000248948 CCDC138Q96M89 665 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 RBBP8Q99708 897 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 CPNE1Q99829 537 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 NDC1Q9BTX1 674 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 DHRS4Q9BTZ2 278 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 ACTL8Q9H568 366 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 SLC6A20Q9NP91 592 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 CCDC177Q9NQR7 707 aaPredicted RBP12.26□□□□□ -0.45
VPREB3-201ENST00000248948 ZDHHC18Q9NUE0 388 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 TXLNGQ9NUQ3 528 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 IRAK4Q9NWZ3 460 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 STOX2Q9P2F5 926 aaPredicted RBP12.26□□□□□ -0.45
VPREB3-201ENST00000248948 TAC3Q9UHF0 121 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 ADAMTS6Q9UKP5 1117 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 PADI2Q9Y2J8 665 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 KLHL20Q9Y2M5 609 aa12.26□□□□□ -0.45
VPREB3-201ENST00000248948 ESYT3A0FGR9 886 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 FITM1A5D6W6 292 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 C9J4A7 227 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 SRPX2O60687 465 aaPredicted RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 CREG1O75629 220 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 C1QAP02745 245 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 HIST1H2AGP0C0S8 130 aaPredicted RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 EZRP15311 586 aaKnown RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 HIST1H2ADP20671 130 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 AGXTP21549 392 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 GP5P40197 560 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 ARSFP54793 590 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 CYP4F2P78329 520 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 SLC7A5Q01650 507 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 RELAQ04206 551 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 PRDX1Q06830 199 aaKnown RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 GRM7Q14831 915 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 NCF4Q15080 339 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 GLE1Q53GS7 698 aaKnown RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 PRAMEF17Q5VTA0 474 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 PRAMEF13Q5VWM6 474 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 ZNF425Q6IV72 752 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 SUSD1Q6UWL2 747 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 CCDC25Q86WR0 208 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 MCATQ8IVS2 390 aaKnown RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 NKAPQ8N5F7 415 aaKnown RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 EXTL1Q92935 676 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 TSPAN17Q96FV3 270 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 HIST1H2AHQ96KK5 128 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 GBP5Q96PP8 586 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 HIST1H2AJQ99878 128 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 ZFYVE21Q9BQ24 234 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 SELENOSQ9BQE4 189 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 H2AFJQ9BTM1 129 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 DPH7Q9BTV6 452 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 NLNQ9BYT8 704 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 PCBD2Q9H0N5 130 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 TSPYL1Q9H0U9 437 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 CHST8Q9H2A9 424 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 ADNPQ9H2P0 1102 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 MRPS30Q9NP92 439 aaKnown RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 SMYD2Q9NRG4 433 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 MTRF1LQ9UGC7 380 aaKnown RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 NOVA2Q9UNW9 492 aaKnown RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 PDE10AQ9Y233 779 aa12.25□□□□□ -0.45
VPREB3-201ENST00000248948 MRPS18BQ9Y676 258 aaKnown RBP12.25□□□□□ -0.45
VPREB3-201ENST00000248948 IGKV1-8A0A0C4DH67 115 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 A0A1B0GX78 115 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 EIF4E1BA6NMX2 242 aaKnown RBP12.24□□□□□ -0.45
VPREB3-201ENST00000248948 NKX2-8O15522 239 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 CTSVO60911 334 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 CD63P08962 238 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 PRKAR1AP10644 381 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 SFTPCP11686 197 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 HRH2P25021 359 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 MAGEA4P43358 317 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 SLC12A2P55011 1212 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 TAS2R39P59534 338 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 GPX6P59796 221 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 POU4F1Q01851 419 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 GUCY2DQ02846 1103 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 TRADDQ15628 312 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 TBR1Q16650 682 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 PHKG1Q16816 387 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 UGT8Q16880 541 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 PTCHD3Q3KNS1 767 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 LINC00303Q3SY05 128 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 SBSNQ6UWP8 590 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 C3orf62Q6ZUJ4 267 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 PAQR7Q86WK9 346 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 RELL1Q8IUW5 271 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 ZNF655Q8N720 491 aaPredicted RBP12.24□□□□□ -0.45
VPREB3-201ENST00000248948 CEP112Q8N8E3 955 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 TTC29Q8NA56 475 aaPredicted RBP12.24□□□□□ -0.45
VPREB3-201ENST00000248948 NOA1Q8NC60 698 aaKnown RBP12.24□□□□□ -0.45
VPREB3-201ENST00000248948 PPFIBP2Q8ND30 876 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 ATL1Q8WXF7 558 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 MED8Q96G25 268 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 GPR22Q99680 433 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 PLCD4Q9BRC7 762 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 ARHGAP9Q9BRR9 750 aa12.24□□□□□ -0.45
VPREB3-201ENST00000248948 ACAT2Q9BWD1 397 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms