RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ADNP2Q6IQ32 1131 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 CAPN13Q6MZZ7 669 aaPredicted RBP17.89■□□□□ 0.46
HOXC11-201ENST00000243082 DOK6Q6PKX4 331 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 LRRC56Q8IYG6 542 aaPredicted RBP17.89■□□□□ 0.46
HOXC11-201ENST00000243082 SYTL1Q8IYJ3 562 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 ANKFN1Q8N957 763 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 LMNTD1Q8N9Z9 388 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.46
HOXC11-201ENST00000243082 SGPP1Q9BX95 441 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 IKZF5Q9H5V7 419 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 SGK2Q9HBY8 427 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 SERHLQ9NQF3 203 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 SLC6A13Q9NSD5 602 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 DLGAP2Q9P1A6 1054 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 SLC23A2Q9UGH3 650 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 AK5Q9Y6K8 562 aa17.89■□□□□ 0.46
HOXC11-201ENST00000243082 TXNDC9O14530 226 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 ADH1BP00325 375 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 C5AR1P21730 350 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 S100A3P33764 101 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 DDX39BQ13838 428 aaKnown RBP17.89■□□□□ 0.45
HOXC11-201ENST00000243082 RUNDC3AQ59EK9 446 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 GLYATQ6IB77 296 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 HDDC3Q8N4P3 179 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 TRPV3Q8NET8 790 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 OR7G3Q8NG95 312 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 CSGALNACT1Q8TDX6 532 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 BIRC7Q96CA5 298 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 C11orf24Q96F05 449 aaPredicted RBP17.89■□□□□ 0.45
HOXC11-201ENST00000243082 EBPLQ9BY08 206 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 PAIP1Q9H074 479 aaKnown RBP17.89■□□□□ 0.45
HOXC11-201ENST00000243082 SCOCQ9UIL1 159 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 MAN2B2Q9Y2E5 1009 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 PCDHGA11Q9Y5H2 935 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 CKAP5Q14008 2032 aa17.89■□□□□ 0.45
HOXC11-201ENST00000243082 A0A1W2PP55 124 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 DPPA5A6NC42 116 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 LRATO95237 230 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 ETHE1O95571 254 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 HSD3B1P14060 373 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 HSD3B2P26439 372 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 TIE1P35590 1138 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 TNFRSF4P43489 277 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 SEC13P55735 322 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 TAP2Q03519 686 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 CYP4F3Q08477 520 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 AGERQ15109 404 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 GTDC1Q4AE62 458 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 DTWD1Q8N5C7 304 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 PAPD5Q8NDF8 572 aaKnown RBP17.88■□□□□ 0.45
HOXC11-201ENST00000243082 SLC29A1Q99808 456 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 KCNH6Q9H252 994 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 BRF2Q9HAW0 419 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 MBNL1Q9NR56 388 aaKnown RBP17.88■□□□□ 0.45
HOXC11-201ENST00000243082 AGPAT4Q9NRZ5 378 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.88■□□□□ 0.45
HOXC11-201ENST00000243082 MAGEL2Q9UJ55 1249 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 SH2B3Q9UQQ2 575 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 AP4B1Q9Y6B7 739 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 TRPM6Q9BX84 2022 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 MAGEB17A8MXT2 336 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 H0YJX3 145 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 UMPSP11172 480 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 PIM1P11309 404 aaPredicted RBP17.88■□□□□ 0.45
HOXC11-201ENST00000243082 STARD3Q14849 445 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 PDK3Q15120 406 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 LRIF1Q5T3J3 769 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 DNAJC14Q6Y2X3 702 aaPredicted RBP17.88■□□□□ 0.45
HOXC11-201ENST00000243082 AMZ2Q86W34 360 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 MARVELD2Q8N4S9 558 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 DNAJB8Q8NHS0 232 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 CIB1Q99828 191 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 GDF15Q99988 308 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 THUMPD3Q9BV44 507 aaKnown RBP17.88■□□□□ 0.45
HOXC11-201ENST00000243082 VCXQ9H320 206 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 ITM2CQ9NQX7 267 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 PCDHB14Q9Y5E9 798 aa17.88■□□□□ 0.45
HOXC11-201ENST00000243082 C7orf72A4D263 438 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 ERN1O75460 977 aaKnown RBP17.87■□□□□ 0.45
HOXC11-201ENST00000243082 B3GALT4O96024 378 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 ZCCHC18P0CG32 403 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 HOXB9P17482 250 aaPredicted RBP17.87■□□□□ 0.45
HOXC11-201ENST00000243082 GGT1P19440 569 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 PTPN6P29350 595 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 PRKCQQ04759 706 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 FGL2Q14314 439 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 NRF1Q16656 503 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 PGS1Q32NB8 556 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 CATSPEREQ5SY80 951 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 KIAA1211LQ6NV74 962 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 UNC5DQ6UXZ4 953 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 TMPRSS11BQ86T26 416 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 OR10A6Q8NH74 314 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 HUS1BQ8NHY5 278 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 GFM2Q969S9 779 aaKnown RBP17.87■□□□□ 0.45
HOXC11-201ENST00000243082 WDR34Q96EX3 536 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 ZNF597Q96LX8 424 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 TEX101Q9BY14 249 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 TM7SF3Q9NS93 570 aa17.87■□□□□ 0.45
HOXC11-201ENST00000243082 ZFR2Q9UPR6 939 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms