RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TWSG1Q9GZX9 223 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 PPCSQ9HAB8 311 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 CCDC177Q9NQR7 707 aaPredicted RBP10.87□□□□□ -0.67
SF3B6-201ENST00000233468 FGF21Q9NSA1 209 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 SIDT1Q9NXL6 827 aaKnown RBP10.87□□□□□ -0.67
SF3B6-201ENST00000233468 ARL15Q9NXU5 204 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 SPHK1Q9NYA1 384 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 ANKMY1Q9P2S6 941 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 CIDEBQ9UHD4 219 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 ZNF180Q9UJW8 692 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 PDE10AQ9Y233 779 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 ACOT9Q9Y305 439 aa10.87□□□□□ -0.67
SF3B6-201ENST00000233468 ARHGEF17Q96PE2 2063 aaPredicted RBP10.87□□□□□ -0.67
SF3B6-201ENST00000233468 C9orf172C9J069 976 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.86□□□□□ -0.67
SF3B6-201ENST00000233468 E7ENX8 843 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 POC1B-GALNT4F8VUJ3 575 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 PRAMEF10O60809 474 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 ANXA5P08758 320 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 HBQ1P09105 142 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 EBLN1P0CF75 366 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 CCDC166P0CW27 439 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 LIPCP11150 499 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 ST6GAL1P15907 406 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 TYK2P29597 1187 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 ETV5P41161 510 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 HNMTP50135 292 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 SERPINB8P50452 374 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 UCNP55089 124 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 CDKL1Q00532 357 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 TAP2Q03519 686 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 TSTA3Q13630 321 aaPredicted RBP10.86□□□□□ -0.67
SF3B6-201ENST00000233468 FAM83EQ2M2I3 478 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 CCSMST1Q4G0I0 132 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 MROH9Q5TGP6 573 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 CAPN13Q6MZZ7 669 aaPredicted RBP10.86□□□□□ -0.67
SF3B6-201ENST00000233468 KLC3Q6P597 504 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 TAX1BP1Q86VP1 789 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 CEP97Q8IW35 865 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 TCAIMQ8N3R3 496 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 C2orf73Q8N5S3 287 aaPredicted RBP10.86□□□□□ -0.67
SF3B6-201ENST00000233468 LRRN4CLQ8ND94 238 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 ZNF480Q8WV37 535 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 COL26A1Q96A83 441 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 MTBPQ96DY7 904 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 THAP11Q96EK4 314 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 TSNARE1Q96NA8 513 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 PAFAH2Q99487 392 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 SLC7A5P2Q9GIP4 190 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 NMRAL1Q9HBL8 299 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 MRPS30Q9NP92 439 aaKnown RBP10.86□□□□□ -0.67
SF3B6-201ENST00000233468 FETUBQ9UGM5 382 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 KLK4Q9Y5K2 254 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 B3GALT1Q9Y5Z6 326 aa10.86□□□□□ -0.67
SF3B6-201ENST00000233468 AHCTF1Q8WYP5 2266 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 IQANK1A0A1B0GTG1 560 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 PHGDHO43175 533 aaKnown RBP10.85□□□□□ -0.67
SF3B6-201ENST00000233468 EFSO43281 561 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 FAM155BO75949 473 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 S100BP04271 92 aaPredicted RBP10.85□□□□□ -0.67
SF3B6-201ENST00000233468 CCNYL3P0C7X3 344 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 FOLR1P15328 257 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 PEBP1P30086 187 aaKnown RBP10.85□□□□□ -0.67
SF3B6-201ENST00000233468 SH3BP2P78314 561 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 RHDQ02161 417 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 PRDX1Q06830 199 aaKnown RBP10.85□□□□□ -0.67
SF3B6-201ENST00000233468 VAC14Q08AM6 782 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 SRSF6Q13247 344 aaKnown RBP10.85□□□□□ -0.67
SF3B6-201ENST00000233468 MAP7Q14244 749 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 ZNF460Q14592 562 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 EFTUD2Q15029 972 aaKnown RBP eCLIP10.85□□□□□ -0.67
SF3B6-201ENST00000233468 CDKL4Q5MAI5 379 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 WDR93Q6P2C0 686 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 EMBQ6PCB8 327 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 FIGLAQ6QHK4 219 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 AGTRAPQ6RW13 159 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 TRIM73Q86UV7 250 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 TMEM126BQ8IUX1 230 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 TBC1D19Q8N5T2 526 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 ESX1Q8N693 406 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 OR2L3Q8NG85 312 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 STAG3L4Q8TBR4 150 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 UBLCP1Q8WVY7 318 aaPredicted RBP10.85□□□□□ -0.67
SF3B6-201ENST00000233468 FBXL8Q96CD0 374 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 CABS1Q96KC9 395 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 MIPEPQ99797 713 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 CTRCQ99895 268 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 EGFL8Q99944 293 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 HAUS8Q9BT25 410 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 EFHD1Q9BUP0 239 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 ULBP3Q9BZM4 244 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 ANKZF1Q9H8Y5 726 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 CNOT10Q9H9A5 744 aaKnown RBP10.85□□□□□ -0.67
SF3B6-201ENST00000233468 CAB39LQ9H9S4 337 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 IRAK4Q9NWZ3 460 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 STOX2Q9P2F5 926 aaPredicted RBP10.85□□□□□ -0.67
SF3B6-201ENST00000233468 ADAMTS6Q9UKP5 1117 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 SNX7Q9UNH6 387 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 PLCL2Q9UPR0 1127 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 OARD1Q9Y530 152 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms