RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ACDQ96AP0 544 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF180Q9UJW8 692 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF221Q9UK13 617 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 CFL2Q9Y281 166 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 NIPSNAP2O75323 286 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 S100A1P23297 94 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 PRAMEF17Q5VTA0 474 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF101Q8IZC7 436 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 THEM6Q8WUY1 208 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 SLC13A3Q8WWT9 602 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 CMTM7Q96FZ5 175 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ZFP3Q96NJ6 502 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 EPYCQ99645 322 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 FEM1AQ9BSK4 669 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ASPNQ9BXN1 380 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 METTL8Q9H825 291 aaKnown RBP12.93□□□□□ -0.34
COL1A1-201ENST00000225964 BRF2Q9HAW0 419 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ATRNL1Q5VV63 1379 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 TCRBV21S2A2A0A5A6 115 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 RLN2P04090 185 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 BCHEP06276 602 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 BMP6P22004 513 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 OR12D2P58182 307 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 CLRN1P58418 232 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF234Q14588 700 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ZFP69Q49AA0 526 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 GXYLT1Q4G148 440 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF782Q6ZMW2 699 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-201ENST00000225964 LYSMD3Q7Z3D4 306 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 PHOSPHO1Q8TCT1 267 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ROPN1LQ96C74 230 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 FUBP3Q96I24 572 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL1A1-201ENST00000225964 SPATA6Q9NWH7 488 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-201ENST00000225964 GLS2Q9UI32 602 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 PLEKHA6Q9Y2H5 1048 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ITGA10O75578 1167 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 LCA5LO95447 670 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 FMO3P31513 532 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 GRK5P34947 590 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 OCLNQ16625 522 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 DECR1Q16698 335 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 C12orf40Q86WS4 652 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 FSTL5Q8N475 847 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-201ENST00000225964 RBM15BQ8NDT2 890 aaKnown RBP12.93□□□□□ -0.34
COL1A1-201ENST00000225964 DENND1AQ8TEH3 1009 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 LRRC46Q96FV0 321 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 SP140LQ9H930 580 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ZCCHC3Q9NUD5 404 aaKnown RBP12.93□□□□□ -0.34
COL1A1-201ENST00000225964 FAM234BA2RU67 622 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ITGA5P08648 1049 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 CA9Q16790 459 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 CWF19L1Q69YN2 538 aaKnown RBP12.93□□□□□ -0.34
COL1A1-201ENST00000225964 SPATC1Q76KD6 591 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 EBF3Q9H4W6 596 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 FZD4Q9ULV1 537 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 KCNK6Q9Y257 313 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 COMMD3-BMI1R4GMX3 469 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 TMEM131LA2VDJ0 1609 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 SLC7A4O43246 635 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 CBLP22681 906 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 AP2S1P53680 142 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-201ENST00000225964 KLHL6Q8WZ60 621 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 BORCS5Q969J3 196 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 ORAI3Q9BRQ5 295 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 SPATA7Q9P0W8 599 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 RAB26Q9ULW5 256 aa12.93□□□□□ -0.34
COL1A1-201ENST00000225964 SPIN1Q9Y657 262 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-201ENST00000225964 A0A1W2PPL8 197 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 A6NCN8 305 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 TRMUO75648 421 aaKnown RBP12.92□□□□□ -0.34
COL1A1-201ENST00000225964 SYNGR4O95473 234 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 GPIP06744 558 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 GP1BBP13224 206 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 CLEC20AQ6ZU45 233 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 THOC6Q86W42 341 aaKnown RBP12.92□□□□□ -0.34
COL1A1-201ENST00000225964 CBR4Q8N4T8 237 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 NUSAP1Q9BXS6 441 aaKnown RBP12.92□□□□□ -0.34
COL1A1-201ENST00000225964 IRS2Q9Y4H2 1338 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 ZSCAN5BA6NJL1 495 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 HAS3O00219 553 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 TNFRSF10BO14763 440 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 CYP11A1P05108 521 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 HCKP08631 526 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 C8orf89P0DMQ9 161 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 TYRP14679 529 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 CRB2Q5IJ48 1285 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 TNFRSF25Q93038 417 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 APOBEC3GQ9HC16 384 aaKnown RBP12.92□□□□□ -0.34
COL1A1-201ENST00000225964 CYP8B1Q9UNU6 501 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 RBM47A0AV96 593 aaKnown RBP12.92□□□□□ -0.34
COL1A1-201ENST00000225964 CCNKO75909 580 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 AGR2O95994 175 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 ADH1BP00325 375 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 ITGB1P05556 798 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 MYLK3Q32MK0 819 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 BEND4Q6ZU67 534 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 CLNKQ7Z7G1 428 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 TMEM17Q86X19 198 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 PDPRQ8NCN5 879 aa12.92□□□□□ -0.34
COL1A1-201ENST00000225964 SLC22A8Q8TCC7 542 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms