RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 FAM72AQ5TYM5 149 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 LRRC66Q68CR7 880 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 FAM72DQ6L9T8 149 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 ENPP7Q6UWV6 458 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 USP30Q70CQ3 517 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 SERINC5Q86VE9 423 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 LRRTM4Q86VH4 590 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 FAM72BQ86X60 149 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 GPR151Q8TDV0 419 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 KCNJ9Q92806 393 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 GORASP1Q9BQQ3 440 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 CCM2Q9BSQ5 444 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 KAT8Q9H7Z6 458 aaKnown RBP11.23□□□□□ -0.61
NOD1-201ENST00000222823 GALNT8Q9NY28 637 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 MOCS1Q9NZB8 636 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 SPATA7Q9P0W8 599 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 ATXN10Q9UBB4 475 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 IQCMA0A1B0GVH7 501 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 A0A1W2PP18 115 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 ARHGEF33A8MVX0 844 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 INPPL1O15357 1258 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 GALTP07902 379 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 TYRP14679 529 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 MASP1P48740 699 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 TGFBIQ15582 683 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 UPP1Q16831 310 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.23□□□□□ -0.61
NOD1-201ENST00000222823 CXorf57Q6NSI4 855 aaKnown RBP11.23□□□□□ -0.61
NOD1-201ENST00000222823 OR4C6Q8NH72 309 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 SMPDL3AQ92484 453 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 HTRA1Q92743 480 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 PDCD10Q9BUL8 212 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 SLC29A3Q9BZD2 475 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 C11orf16Q9NQ32 467 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 ZNF222Q9UK12 451 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 CLEC4AQ9UMR7 237 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 A0A0D9SEW6 157 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 PDLIM1O00151 329 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 GIMD1P0DJR0 217 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 CDH1P12830 882 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 ENGP17813 658 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 NDUFS1P28331 727 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 ETV4P43268 484 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 PPP1R8Q12972 351 aaKnown RBP11.23□□□□□ -0.61
NOD1-201ENST00000222823 IL18R1Q13478 541 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 LY6G5CQ5SRR4 150 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 PPP2R2DQ66LE6 453 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 C22orf39Q6P5X5 142 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 PLD6Q8N2A8 252 aaKnown RBP11.23□□□□□ -0.61
NOD1-201ENST00000222823 CELF5Q8N6W0 485 aaKnown RBP11.23□□□□□ -0.61
NOD1-201ENST00000222823 TRPV3Q8NET8 790 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 BPIFB1Q8TDL5 484 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 C1orf74Q96LT6 269 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 BCL2L14Q9BZR8 327 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 OR51V1Q9H2C8 321 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 C11orf49Q9H6J7 331 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 ELOVL2Q9NXB9 296 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 MAP10Q9P2G4 905 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 A0A1W2PQ45 241 aaPredicted RBP11.23□□□□□ -0.61
NOD1-201ENST00000222823 A0A1W2PQY0 241 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 STX16O14662 325 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 MAGEB3O15480 346 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 C9P02748 559 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 IQCF3P0C7M6 154 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 CBSLP0DN79 551 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 DDX6P26196 483 aaKnown RBP eCLIP11.23□□□□□ -0.61
NOD1-201ENST00000222823 CBSP35520 551 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 TIE1P35590 1138 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 KHKP50053 298 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 CLCN4P51793 760 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 DMPKQ09013 629 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 BICRALQ6AI39 1079 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 AGTRAPQ6RW13 159 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 SMARCD3Q6STE5 483 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 RPS27LQ71UM5 84 aaKnown RBP11.23□□□□□ -0.61
NOD1-201ENST00000222823 CDH24Q86UP0 819 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 TMEM145Q8NBT3 493 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 C2CD4AQ8NCU7 369 aaPredicted RBP11.23□□□□□ -0.61
NOD1-201ENST00000222823 TP53INP1Q96A56 240 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 ZBTB26Q9HCK0 441 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 B4GALT6Q9UBX8 382 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 ING4Q9UNL4 249 aa11.23□□□□□ -0.61
NOD1-201ENST00000222823 LY75O60449 1722 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 SOD2P04179 222 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 PGRP06401 933 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 CHRM5P08912 532 aaPredicted RBP11.22□□□□□ -0.61
NOD1-201ENST00000222823 FSHRP23945 695 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 NCBP2P52298 156 aaKnown RBP eCLIP11.22□□□□□ -0.61
NOD1-201ENST00000222823 RAB6CQ53S08 254 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 SPIN4Q56A73 249 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 GPRC6AQ5T6X5 926 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 EGFLAMQ63HQ2 1017 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 Q6ZVL8 140 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 SATL1Q86VE3 508 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 KCT2Q8NC54 265 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 ATP6V1C2Q8NEY4 427 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 PSKH2Q96QS6 385 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 RAB6CQ9H0N0 254 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 CDH7Q9ULB5 785 aa11.22□□□□□ -0.61
NOD1-201ENST00000222823 FZD4Q9ULV1 537 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms