RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 MAP2K4P45985 399 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 GZMMP51124 257 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 BMXP51813 675 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 MLLT10P55197 1068 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 DGCR6Q14129 220 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 ATG9BQ674R7 924 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 GALNT18Q6P9A2 607 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 HTR3DQ70Z44 454 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 OR5K1Q8NHB7 308 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 MAL2Q969L2 176 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 DNAJC11Q9NVH1 559 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 TMEM45AQ9NWC5 275 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 TMEFF2Q9UIK5 374 aaPredicted RBP14.2□□□□□ -0.14
CNOT3-201ENST00000221232 BAG5Q9UL15 447 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 CORINQ9Y5Q5 1042 aa14.2□□□□□ -0.14
CNOT3-201ENST00000221232 MAPK8P45983 427 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 ATP1A4Q13733 1029 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 CBARPQ8N350 705 aaPredicted RBP14.19□□□□□ -0.14
CNOT3-201ENST00000221232 FNDC8Q8TC99 324 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 UBTD2Q8WUN7 234 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 ZNF296Q8WUU4 475 aaPredicted RBP14.19□□□□□ -0.14
CNOT3-201ENST00000221232 SH3KBP1Q96B97 665 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 RIOK2Q9BVS4 552 aaKnown RBP14.19□□□□□ -0.14
CNOT3-201ENST00000221232 FUNDC2Q9BWH2 189 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 RNF208Q9H0X6 261 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 ZNF232Q9UNY5 417 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 ORC6Q9Y5N6 252 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 SNX5Q9Y5X3 404 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 TRAV19A0A0A6YYK7 116 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 BCKDKO14874 412 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 LAMP1P11279 417 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 IGFBP5P24593 272 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 PTPN6P29350 595 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 C21orf59P57076 290 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 ISL1P61371 349 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 SPCS2Q15005 226 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 SKIV2LQ15477 1246 aaKnown RBP14.19□□□□□ -0.14
CNOT3-201ENST00000221232 ARSIQ5FYB1 569 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 PDE12Q6L8Q7 609 aaKnown RBP14.19□□□□□ -0.14
CNOT3-201ENST00000221232 ZCCHC7Q8N3Z6 543 aaKnown RBP14.19□□□□□ -0.14
CNOT3-201ENST00000221232 ZNF420Q8TAQ5 688 aaPredicted RBP14.19□□□□□ -0.14
CNOT3-201ENST00000221232 NRBF2Q96F24 287 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 YTHDF1Q9BYJ9 559 aaKnown RBP14.19□□□□□ -0.14
CNOT3-201ENST00000221232 SLC29A3Q9BZD2 475 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 ERVK-18Q9QC07 812 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 C3orf18Q9UK00 162 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 DOLKQ9UPQ8 538 aa14.19□□□□□ -0.14
CNOT3-201ENST00000221232 KCNE1BA0A087WTH5 132 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 SAP18O00422 153 aaKnown RBP14.18□□□□□ -0.14
CNOT3-201ENST00000221232 OLFM2O95897 454 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 C8AP07357 584 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 TTKP33981 857 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 BDKRB1P46663 353 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 PFN3P60673 137 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 UGT8Q16880 541 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 CYP27C1Q4G0S4 372 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 CRTC3Q6UUV7 619 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 CALHM3Q86XJ0 350 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 SLC15A4Q8N697 577 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 CMTM7Q96FZ5 175 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 NODALQ96S42 347 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 PDP1Q9P0J1 537 aaPredicted RBP14.18□□□□□ -0.14
CNOT3-201ENST00000221232 FAM220BPB1ANY3 271 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 SLC1A7O00341 560 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 SEC14L2O76054 403 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 ETHE1O95571 254 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 POP4O95707 220 aaKnown RBP14.18□□□□□ -0.14
CNOT3-201ENST00000221232 CPNE6O95741 557 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 TNFRSF1BP20333 461 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 CYP2A7P20853 494 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 HTR1BP28222 390 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 VLDLRP98155 873 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 HKDC1Q2TB90 917 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 RBM48Q5RL73 367 aaKnown RBP14.18□□□□□ -0.14
CNOT3-201ENST00000221232 FAM180BQ6P0A1 224 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 SLAIN1Q8ND83 568 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 HDAC2Q92769 488 aaKnown RBP14.18□□□□□ -0.14
CNOT3-201ENST00000221232 PRDM8Q9NQV8 689 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 ZNF451Q9Y4E5 1061 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 ANAPC1Q9H1A4 1944 aa14.18□□□□□ -0.14
CNOT3-201ENST00000221232 AGAP14A8MT82 685 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 TTC34A8MYJ7 566 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 RECQL5O94762 991 aaPredicted RBP14.17□□□□□ -0.14
CNOT3-201ENST00000221232 LATS1O95835 1130 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 CXCL10P02778 98 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 CBSLP0DN79 551 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 PRPS2P11908 318 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 CBSP35520 551 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 DAPP51397 102 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 CTSCP53634 463 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 HTRA3P83110 453 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 CDK5R2Q13319 367 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 AQP6Q13520 282 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 DOC2AQ14183 400 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 CPZQ66K79 652 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 GDPD4Q6W3E5 623 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 SNX29P2Q8IUI4 249 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 SVOPLQ8N434 492 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 DOK1Q99704 481 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms