RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ZNF540Q8NDQ6 660 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 SUN5Q8TC36 379 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 FGF14Q92915 247 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 WDR92Q96MX6 357 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 MTERF1Q99551 399 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 ING3Q9NXR8 418 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 GALPQ9UBC7 116 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF221Q9UK13 617 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 TRAFD1O14545 582 aaPredicted RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 PTPN5P54829 565 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 WDR4P57081 412 aaKnown RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 VWA5B1Q5TIE3 1220 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 OR4E2Q8NGC2 313 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 NMUR2Q9GZQ4 415 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 MOCS1Q9NZB8 636 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 COLQQ9Y215 455 aaPredicted RBP9.18□□□□□ -0.94
CCDC113-201ENST00000219299 SLC22A14Q9Y267 594 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 WDR37Q9Y2I8 494 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 SCN10AQ9Y5Y9 1956 aa9.18□□□□□ -0.94
CCDC113-201ENST00000219299 SAGE2PA6NJ88 616 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 K7EPI3 171 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 SLC28A1O00337 649 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 KCNH1O95259 989 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 S1PR4O95977 384 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 CDKN1CP49918 316 aaPredicted RBP9.17□□□□□ -0.94
CCDC113-201ENST00000219299 PTPRRQ15256 657 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 ZFP69Q49AA0 526 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 C10orf53Q8N6V4 93 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 MCFD2Q8NI22 146 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 FBXO30Q8TB52 745 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 BOCQ9BWV1 1114 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 ITM2CQ9NQX7 267 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 GPR39O43194 453 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 LATO43561 262 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF217O75362 1048 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 CYP7B1O75881 506 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 IGLV3-25P01717 112 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 TYRP1P17643 537 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 ITGB7P26010 798 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 BDKRB1P46663 353 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 CDC42P60953 191 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 TYSND1Q2T9J0 566 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 KHDC1Q4VXA5 237 aaKnown RBP9.17□□□□□ -0.94
CCDC113-201ENST00000219299 ACSBG2Q5FVE4 666 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 KHDRBS2Q5VWX1 349 aaKnown RBP9.17□□□□□ -0.94
CCDC113-201ENST00000219299 FAM129CQ86XR2 697 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 CDK20Q8IZL9 346 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 C7orf26Q96N11 449 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 FAIM2Q9BWQ8 316 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 EPB41L4BQ9H329 900 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 OBP2AQ9NY56 170 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 IL37Q9NZH6 218 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 STOML2Q9UJZ1 356 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 MKL2Q9ULH7 1088 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 HOXB6P17509 224 aaKnown RBP9.17□□□□□ -0.94
CCDC113-201ENST00000219299 CCNFP41002 786 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 SUOXP51687 545 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 AP1S2P56377 157 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 MAPKAPK3Q16644 382 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF781Q8N8C0 355 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 SETD7Q8WTS6 366 aaKnown RBP9.17□□□□□ -0.94
CCDC113-201ENST00000219299 CDK15Q96Q40 435 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 OR2M4Q96R27 311 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 FBRSQ9HAH7 460 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 EBF2Q9HAK2 575 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 LHX3Q9UBR4 397 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 FADS3Q9Y5Q0 445 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 CHRNGP07510 517 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 NDUFS1P28331 727 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 LEPRP48357 1165 aaKnown RBP9.17□□□□□ -0.94
CCDC113-201ENST00000219299 PLA2G16P53816 162 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 SPESP1Q6UW49 350 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 LIPIQ6XZB0 460 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 RELL1Q8IUW5 271 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 DSELQ8IZU8 1212 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 DEPDC4Q8N2C3 294 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 UXS1Q8NBZ7 420 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 GPR26Q8NDV2 337 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 HM13Q8TCT9 377 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 TWIST2Q8WVJ9 160 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 TSACCQ96A04 125 aaPredicted RBP9.17□□□□□ -0.94
CCDC113-201ENST00000219299 ELSPBP1Q96BH3 223 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 TOE1Q96GM8 510 aaKnown RBP9.17□□□□□ -0.94
CCDC113-201ENST00000219299 TPD52L3Q96J77 140 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 MIPEPQ99797 713 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 TBCDQ9BTW9 1192 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 SSU72Q9NP77 194 aaKnown RBP9.17□□□□□ -0.94
CCDC113-201ENST00000219299 CCDC59Q9P031 241 aaKnown RBP9.17□□□□□ -0.94
CCDC113-201ENST00000219299 HEBP2Q9Y5Z4 205 aa9.17□□□□□ -0.94
CCDC113-201ENST00000219299 CNOT1A5YKK6 2376 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ZCWPW2A0A1B0GU75 182 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 HAT1O14929 419 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 DLX3O60479 287 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 TMCC2O75069 709 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 TIMP2P16035 220 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 ACRV1P26436 265 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 GMPRP36959 345 aa9.16□□□□□ -0.94
CCDC113-201ENST00000219299 FEN1P39748 380 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 MRPS21P82921 87 aaKnown RBP9.16□□□□□ -0.94
CCDC113-201ENST00000219299 FOXM1Q08050 763 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms