RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PPP4R1Q8TF05 950 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 L3HYPDHQ96EM0 354 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 HAUS8Q9BT25 410 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 RAB33BQ9H082 229 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 KLHL25Q9H0H3 589 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 EPHA6Q9UF33 1036 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 KLHL20Q9Y2M5 609 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 DYRK1BQ9Y463 629 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 CEP250Q9BV73 2442 aa26.27■■□□□ 1.8
CHMP4B-201ENST00000217402 NTN3O00634 580 aaPredicted RBP26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 TRIM13O60858 407 aa26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 LSSP48449 732 aa26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 DNAJB13P59910 316 aa26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 SIM1P81133 766 aaPredicted RBP26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 CDC16Q13042 620 aa26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 GTF2H2Q13888 395 aa26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 UNC50Q53HI1 259 aa26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 GTF2H2CQ6P1K8 395 aa26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 GOLGA7Q7Z5G4 137 aa26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 MAP3K3Q99759 626 aa26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 MRPS30Q9NP92 439 aaKnown RBP26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 SPEGQ15772 3267 aa26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 MN1Q10571 1320 aaPredicted RBP26.26■■□□□ 1.79
CHMP4B-201ENST00000217402 D6RAR5 112 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 BIRC5O15392 142 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 RASSF9O75901 435 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 NEFHP12036 1026 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 PVRP15151 417 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 EPB42P16452 691 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 TSPAN8P19075 237 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 CDH3P22223 829 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 CMPK1P30085 196 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 CDH13P55290 713 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 SQSTM1Q13501 440 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 SLC5A12Q1EHB4 618 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 KIAA1614Q5VZ46 1190 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 C17orf64Q86WR6 236 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 ZNF483Q8TF39 744 aaPredicted RBP26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 SREK1Q8WXA9 508 aaKnown RBP26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 NEIL2Q969S2 332 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 C1QTNF3Q9BXJ4 246 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 SEMA4BQ9NPR2 832 aaPredicted RBP26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 CUEDC1Q9NWM3 386 aaPredicted RBP26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 PCDHGA1Q9Y5H4 931 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 KCNE2Q9Y6J6 123 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 A0A0J9YY10 115 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 CCNDBP1O95273 360 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 C9P02748 559 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 FTH1P19P0C7X4 201 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 PRDX1Q06830 199 aaKnown RBP26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 ASPHQ12797 758 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 CFAP157Q5JU67 520 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 TMEM71Q6P5X7 295 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 ZNF574Q6ZN55 896 aaPredicted RBP26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 SLCO6A1Q86UG4 719 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 PPP1R14CQ8TAE6 165 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 GATA5Q9BWX5 397 aaPredicted RBP26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 SLC6A20Q9NP91 592 aa26.25■■□□□ 1.79
CHMP4B-201ENST00000217402 TLCD2A6NGC4 264 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 E7EQ34 232 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 FGF3P11487 239 aaPredicted RBP26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 CDH1P12830 882 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 CEACAM1P13688 526 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 EPORP19235 508 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 MAGP20916 626 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 PLA2G5P39877 138 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 E2F1Q01094 437 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 CHI3L2Q15782 390 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 METTL2BQ6P1Q9 378 aaKnown RBP26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 DHRS13Q6UX07 377 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 TMPRSS11BQ86T26 416 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 SLC5A11Q8WWX8 675 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 ZBTB26Q9HCK0 441 aa26.24■■□□□ 1.79
CHMP4B-201ENST00000217402 UNC13CQ8NB66 2214 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 A8MU76 341 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 BGNP21810 368 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 PIK3CGP48736 1102 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 CLDN6P56747 220 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 ABATP80404 500 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 CACHD1Q5VU97 1274 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 ADCK2Q7Z695 626 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 OR4D9Q8NGE8 314 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 WDR48Q8TAF3 677 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 CD180Q99467 661 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 DPH7Q9BTV6 452 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 SEMA6CQ9H3T2 930 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 GSTO2Q9H4Y5 243 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 NOL11Q9H8H0 719 aaKnown RBP26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 IPPKQ9H8X2 491 aa26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 INTS9Q9NV88 658 aaKnown RBP26.23■■□□□ 1.79
CHMP4B-201ENST00000217402 IGKV1-8A0A0C4DH67 115 aa26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 PCNX2A6NKB5 2137 aa26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 GNAZP19086 355 aa26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 ARL1P40616 181 aaPredicted RBP26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 CCR10P46092 362 aa26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 INSM1Q01101 510 aaPredicted RBP26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 CLCQ05315 142 aa26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 RBBP7Q16576 425 aa26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 CLPPQ16740 277 aaPredicted RBP26.22■■□□□ 1.79
CHMP4B-201ENST00000217402 CATSPEREQ5SY80 951 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms