RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 UBE2R2Q712K3 238 aaPredicted RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 TSPYL5Q86VY4 417 aaPredicted RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 CRIPAKQ8N1N5 446 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 OR10Q1Q8NGQ4 319 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 WFDC5Q8TCV5 224 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 FCRL1Q96LA6 429 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 GPRC5BQ9NZH0 403 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 DAPK2Q9UIK4 370 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 TBKBP1A7MCY6 615 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 DPM1O60762 260 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 AMD1P17707 334 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 FMO3P31513 532 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 CCR7P32248 378 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 NEK2P51955 445 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 SRSF11Q05519 484 aaKnown RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 SLC14A1Q13336 389 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 GTF2H3Q13889 308 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 SIM2Q14190 667 aaPredicted RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 GBX1Q14549 363 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 VMACQ2NL98 169 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 ADPRMQ3LIE5 342 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 ZCCHC8Q6NZY4 707 aaKnown RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 FAM43BQ6ZT52 329 aaPredicted RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 NAT16Q8N8M0 369 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 GPR26Q8NDV2 337 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 ZNF461Q8TAF7 563 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 ZNF300Q96RE9 604 aaPredicted RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 COPS8Q99627 209 aa12.93□□□□□ -0.34
SRP54-201ENST00000216774 BARD1Q99728 777 aaKnown RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 TRNAU1APQ9NX07 287 aaKnown RBP12.93□□□□□ -0.34
SRP54-201ENST00000216774 RGS10O43665 173 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 NUAK1O60285 661 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 GREM1O60565 184 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 ABLIM3O94929 683 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 IGSF6O95976 241 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 HIST1H2AGP0C0S8 130 aaPredicted RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 GPX2P18283 190 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 HIST1H2ADP20671 130 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 AOAHP28039 575 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 SERPINA4P29622 427 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 ZNF33BQ06732 778 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 SP140Q13342 867 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 CLCA4Q14CN2 919 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 VEPH1Q14D04 833 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 FRG2Q64ET8 278 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 OR4F3Q6IEY1 312 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 NOXRED1Q6NXP6 359 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 Q6ZNB5 142 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 HORMAD1Q86X24 394 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 ZZZ3Q8IYH5 903 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 APCDD1Q8J025 514 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 TTC29Q8NA56 475 aaPredicted RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 NDNFQ8TB73 568 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 PHF10Q8WUB8 498 aaKnown RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 ASB11Q8WXH4 323 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 TAMM41Q96BW9 452 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 APIPQ96GX9 242 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 HIST1H2AHQ96KK5 128 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 FRG2BQ96QU4 278 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 HIST1H2AJQ99878 128 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 TSEN34Q9BSV6 310 aaKnown RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 H2AFJQ9BTM1 129 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 ATAD3AQ9NVI7 634 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 YIPF1Q9Y548 306 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 IGLV3-16A0A075B6K0 115 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 PABPN1LA6NDY0 278 aaKnown RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 NPIPB15A6NHN6 443 aaPredicted RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 MYO1GB0I1T2 1018 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 CLIC1O00299 241 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 FPGTO14772 594 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 AXIN1O15169 862 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 EPN2O95208 641 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 LRATO95237 230 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 KCNK5O95279 499 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 B3GALT4O96024 378 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 ALOX5P09917 674 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 OR56A5P0C7T3 313 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 CYP4B1P13584 511 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 ENGP17813 658 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 KDELR2P33947 212 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 HPCAL1P37235 193 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 MAP2K4P45985 399 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 GPNMBQ14956 572 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 MAD2L1BPQ15013 274 aaPredicted RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 ZXDCQ2QGD7 858 aaPredicted RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 PROX2Q3B8N5 592 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 KIAA1614Q5VZ46 1190 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 TPGS2Q68CL5 300 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 NEK5Q6P3R8 708 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 EIF3MQ7L2H7 374 aaKnown RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 PRSS48Q7RTY5 328 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 GPR155Q7Z3F1 870 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 BTLAQ7Z6A9 289 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 TSPAN33Q86UF1 283 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 FAM217AQ8IXS0 508 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 MFSD4AQ8N468 514 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 CPA6Q8N4T0 437 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 DYNC2LI1Q8TCX1 351 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 GLMNQ92990 594 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms