RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 UROC1Q96N76 676 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 MTERF1Q99551 399 aaKnown RBP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 ASPNQ9BXN1 380 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 PNPLA6Q8IY17 1366 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 NUP205Q92621 2012 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF670-ZNF695F2Z2N8 137 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 BPGMP07738 259 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 IDSP22304 550 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 RPS3P23396 243 aaKnown RBP eCLIP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 SPAM1P38567 509 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 MLLT3P42568 568 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 BDH1Q02338 343 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 TLE3Q04726 772 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 NKAPLQ5M9Q1 402 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 DPF1Q92782 380 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 NMUR2Q9GZQ4 415 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 REV1Q9UBZ9 1251 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 TGM6O95932 706 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 CH25HO95992 272 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 CYP3A5P20815 502 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 MAPK3P27361 379 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 WASP42768 502 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 CDKN1CP49918 316 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 GBE1Q04446 702 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 ABRAXAS2Q15018 415 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 PLGLAQ15195 96 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 COL28A1Q2UY09 1125 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 ARL5BQ96KC2 179 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 ADAM18Q9Y3Q7 739 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 TNFSF12O43508 249 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 SMSP52788 366 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 PTGR1Q14914 329 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 TCEAL4Q96EI5 215 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 DPYSL5Q9BPU6 564 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 DNAJC28Q9NX36 388 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 ARGFXA6NJG6 315 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 CCL16O15467 120 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 CDRT1O95170 752 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 ALPPL2P10696 532 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 EPHX2P34913 555 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF136P52737 540 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF674Q2M3X9 581 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 KLHDC10Q6PID8 442 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 PCDHGB6Q9Y5F9 930 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 A0A0A6YYH2 397 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 A6NJ64 397 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 POLR1CO15160 346 aaPredicted RBP14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 CDKN2CP42773 168 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 TRIM28Q13263 835 aaKnown RBP14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 AKR1C8PQ5T2L2 129 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF619Q8N2I2 560 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 PLK2Q9NYY3 685 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 KLRF1Q9NZS2 232 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 TMPRSS11EQ9UL52 423 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 BLOC1S5-TXNDC5H3BN57 136 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 GRID2O43424 1007 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 CDK14O94921 469 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 ADH6P28332 368 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 QPCTQ16769 361 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 PLEKHN1Q494U1 663 aaPredicted RBP14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 TPRG1LQ5T0D9 272 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 TMEM199Q8N511 208 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 FAM156AQ8NDB6 213 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 OR6C74A6NCV1 312 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 A8MUA0 341 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 ERBB2P04626 1255 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 GTF2F2P13984 249 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 CDK18Q07002 472 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 CLNKQ7Z7G1 428 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 SLC9A9Q8IVB4 645 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 PCBD2Q9H0N5 130 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 DENND2DQ9H6A0 471 aaPredicted RBP14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 OR2S2Q9NQN1 319 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 C5orf60A6NFR6 353 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 EPHX1P07099 455 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 TOB1P50616 345 aaPredicted RBP14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 MPP1Q00013 466 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 ZER1Q7Z7L7 766 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 ELMOD2Q8IZ81 293 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 PRMT6Q96LA8 375 aaPredicted RBP14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 EBF3Q9H4W6 596 aa14.29□□□□□ -0.12
SPTLC2-201ENST00000216484 F5H0A9 414 aaPredicted RBP14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 SMAD3P84022 425 aaKnown RBP14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF529Q6P280 563 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 ZPBP2Q6X784 338 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 MOB2Q70IA6 237 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 HID1Q8IV36 788 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 CNTD1Q8N815 330 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 WDSUB1Q8N9V3 476 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 NCSTNQ92542 709 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 RNF208Q9H0X6 261 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 AMBNQ9NP70 447 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 SALL1Q9NSC2 1324 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 NPHP4O75161 1426 aaPredicted RBP14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 GSTM2P28161 218 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 RARRES1P49788 294 aa14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 HNRNPKP61978 463 aaKnown RBP eCLIP14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 TSTQ16762 297 aaKnown RBP14.28□□□□□ -0.12
SPTLC2-201ENST00000216484 LPPQ93052 612 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms