RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 SVOPQ8N4V2 548 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 CNTD1Q8N815 330 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 PTCHD1Q96NR3 888 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 NECTIN3Q9NQS3 549 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 MARCH4Q9P2E8 410 aaPredicted RBP11.09□□□□□ -0.63
PKP2-201ENST00000070846 PKD1L3Q7Z443 1732 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 FAM86C2PA6NEL3 165 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 TMEM233B4DJY2 109 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 TRIM24O15164 1050 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 STX11O75558 287 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 PSMG1O95456 288 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 BPIP17213 487 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 DEFA1P59665 94 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 DEFA3P59666 94 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 RPS13P62277 151 aaKnown RBP11.09□□□□□ -0.63
PKP2-201ENST00000070846 SLC7A9P82251 487 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 NFE2L1Q14494 772 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 TICAM1Q8IUC6 712 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 IGDCC3Q8IVU1 814 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 ZNF671Q8TAW3 534 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 OXSMQ9NWU1 459 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 IKZF2Q9UKS7 526 aa11.09□□□□□ -0.63
PKP2-201ENST00000070846 SMIM31A0A1B0GVY4 71 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 IFNGP01579 166 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 GIMD1P0DJR0 217 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 RBMS1P29558 406 aaKnown RBP11.08□□□□□ -0.64
PKP2-201ENST00000070846 ADSLP30566 484 aaPredicted RBP11.08□□□□□ -0.64
PKP2-201ENST00000070846 SLC6A4P31645 630 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 MTPNP58546 118 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 GRIN2CQ14957 1233 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 MPP7Q5T2T1 576 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 EGFLAMQ63HQ2 1017 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 KIAA1161Q6NSJ0 714 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 SLC36A4Q6YBV0 504 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 RBM15BQ8NDT2 890 aaKnown RBP11.08□□□□□ -0.64
PKP2-201ENST00000070846 LPGAT1Q92604 370 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 COL21A1Q96P44 957 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 CPEB1Q9BZB8 566 aaKnown RBP11.08□□□□□ -0.64
PKP2-201ENST00000070846 ZBP1Q9H171 429 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 NEK6Q9HC98 313 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 MCCC2Q9HCC0 563 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 CLN6Q9NWW5 311 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 UTS2RQ9UKP6 389 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 SCML1Q9UN30 329 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 SIT1Q9Y3P8 196 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 LOC100506127A0A0U1RQW1 187 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 BTN3A3O00478 584 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 TIPRLO75663 272 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 TRAPPC6AO75865 159 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 OR2B3O76000 313 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 KRT36O76013 467 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 PRAMEF12O95522 483 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 HLA-FP30511 346 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 SUOXP51687 545 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 PGGT1BP53609 377 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.08□□□□□ -0.64
PKP2-201ENST00000070846 LYSMD4Q5XG99 296 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 MFSD6LQ8IWD5 586 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 NPAS3Q8IXF0 933 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 PNPLA1Q8N8W4 532 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 FAM13CQ8NE31 585 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 DENND1AQ8TEH3 1009 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 ZHX1-C8orf76Q96EF9 292 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 TRMT2BQ96GJ1 504 aaKnown RBP11.08□□□□□ -0.64
PKP2-201ENST00000070846 RTKNQ9BST9 563 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 DERL2Q9GZP9 239 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 TOR4AQ9NXH8 423 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 FETUBQ9UGM5 382 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 RNF11Q9Y3C5 154 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 WASF2Q9Y6W5 498 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 ATP6V1G2O95670 118 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 HOXC12P31275 282 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 DGKQP52824 942 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 FAM189BP81408 668 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 RAPSNQ13702 412 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 ZNF267Q14586 743 aaPredicted RBP11.08□□□□□ -0.64
PKP2-201ENST00000070846 AP1ARQ63HQ0 302 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 GALNT18Q6P9A2 607 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 AMIGO1Q86WK6 493 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 DCAKDQ8WVC6 231 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 TMEM125Q96AQ2 219 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 SLC47A1Q96FL8 570 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 ALG2Q9H553 416 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 CSNK1G1Q9HCP0 422 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 PHF11Q9UIL8 331 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 DLGAP4Q9Y2H0 992 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 CAB39Q9Y376 341 aaPredicted RBP11.08□□□□□ -0.64
PKP2-201ENST00000070846 PBX2P40425 430 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 WDR4P57081 412 aaKnown RBP11.08□□□□□ -0.64
PKP2-201ENST00000070846 ZNF252P-AS1Q0IIN9 211 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 OR4F3Q6IEY1 312 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 Q6ZSR6 202 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 RTL10Q7L3V2 364 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 FAM156AQ8NDB6 213 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 HCAR2Q8TDS4 363 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 PGAP3Q96FM1 320 aaPredicted RBP11.08□□□□□ -0.64
PKP2-201ENST00000070846 EBF4Q9BQW3 602 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 ZNF395Q9H8N7 513 aaPredicted RBP11.08□□□□□ -0.64
PKP2-201ENST00000070846 MOCS1Q9NZB8 636 aa11.08□□□□□ -0.64
PKP2-201ENST00000070846 ZNF624Q9P2J8 865 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms