RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ATP1B2P14415 290 aaPredicted RBP12.77□□□□□ -0.37
CTNS-201ENST00000046640 CDKN2CP42773 168 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 RECQLP46063 649 aaPredicted RBP12.77□□□□□ -0.37
CTNS-201ENST00000046640 RGS21Q2M5E4 152 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 TRIM16LQ309B1 348 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 CCSMST1Q4G0I0 132 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 MPP7Q5T2T1 576 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 IRAK1BP1Q5VVH5 260 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 LYPLAL1Q5VWZ2 237 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 ADNP2Q6IQ32 1131 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 GDPD4Q6W3E5 623 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 TMEM179BQ7Z7N9 219 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 MED8Q96G25 268 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 MTERF1Q99551 399 aaKnown RBP12.77□□□□□ -0.37
CTNS-201ENST00000046640 MYOCQ99972 504 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 TBCCD1Q9NVR7 557 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 PSME2Q9UL46 239 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 HS3ST2Q9Y278 367 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 PCDHB14Q9Y5E9 798 aa12.77□□□□□ -0.37
CTNS-201ENST00000046640 TMEM247A6NEH6 219 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 CLPXO76031 633 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 KRT6AP02538 564 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 KRT6BP04259 564 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 AOAHP28039 575 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 HTR1BP28222 390 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 KRT6CP48668 564 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 CSNK1DP48730 415 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 CD47Q08722 323 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 SPIDRQ14159 915 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 LILRA6Q6PI73 481 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 NCCRP1Q6ZVX7 275 aaPredicted RBP12.76□□□□□ -0.37
CTNS-201ENST00000046640 CBARPQ8N350 705 aaPredicted RBP12.76□□□□□ -0.37
CTNS-201ENST00000046640 PAPD5Q8NDF8 572 aaKnown RBP12.76□□□□□ -0.37
CTNS-201ENST00000046640 ECHDC3Q96DC8 303 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 SLC47A1Q96FL8 570 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 LMLNQ96KR4 655 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 NTMT1Q9BV86 223 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 RIOK2Q9BVS4 552 aaKnown RBP12.76□□□□□ -0.37
CTNS-201ENST00000046640 YIPF2Q9BWQ6 316 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.76□□□□□ -0.37
CTNS-201ENST00000046640 MAGEL2Q9UJ55 1249 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 ARNTLO00327 626 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 BCAS1O75363 584 aaPredicted RBP12.76□□□□□ -0.37
CTNS-201ENST00000046640 SEC14L2O76054 403 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 FTH1P02794 183 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 ADH1AP07327 375 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 HTR1AP08908 422 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 PORP16435 677 aaPredicted RBP12.76□□□□□ -0.37
CTNS-201ENST00000046640 CDH3P22223 829 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 FMO3P31513 532 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 IDUAP35475 653 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 PRMT2P55345 433 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 IL5RAQ01344 420 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 FOXD4Q12950 439 aaPredicted RBP12.76□□□□□ -0.37
CTNS-201ENST00000046640 SIM2Q14190 667 aaPredicted RBP12.76□□□□□ -0.37
CTNS-201ENST00000046640 MAPK11Q15759 364 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 USP39Q53GS9 565 aaKnown RBP12.76□□□□□ -0.37
CTNS-201ENST00000046640 C6orf141Q5SZD1 244 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 ADIPOR2Q86V24 386 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 ABHD11Q8NFV4 315 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 PNPT1Q8TCS8 783 aaKnown RBP12.76□□□□□ -0.37
CTNS-201ENST00000046640 PRDM8Q9NQV8 689 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 GPRC5BQ9NZH0 403 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 SNX5Q9Y5X3 404 aa12.76□□□□□ -0.37
CTNS-201ENST00000046640 ADAM23O75077 832 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 DIRAS1O95057 198 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 PFKLP17858 780 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 GGT1P19440 569 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 MAP2K4P45985 399 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 METAP1P53582 386 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 RPS14P62263 151 aaKnown RBP12.75□□□□□ -0.37
CTNS-201ENST00000046640 VAC14Q08AM6 782 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 CHIT1Q13231 466 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 CARTPTQ16568 116 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 DPY19L1Q2PZI1 675 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 TRIM46Q7Z4K8 759 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 CHDHQ8NE62 594 aaPredicted RBP12.75□□□□□ -0.37
CTNS-201ENST00000046640 ASB11Q8WXH4 323 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 IRF7Q92985 503 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 MBOAT4Q96T53 435 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 WRAP53Q9BUR4 548 aaKnown RBP12.75□□□□□ -0.37
CTNS-201ENST00000046640 FAM83DQ9H4H8 585 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 ZDHHC4Q9NPG8 344 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 POLE4Q9NR33 117 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 TDP1Q9NUW8 608 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 CXXC1Q9P0U4 656 aaPredicted RBP12.75□□□□□ -0.37
CTNS-201ENST00000046640 PNMA8BQ9ULN7 279 aaPredicted RBP12.75□□□□□ -0.37
CTNS-201ENST00000046640 DNAH14Q0VDD8 3507 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 AGAP14A8MT82 685 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 H0YAE9 185 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 PER2O15055 1255 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 CPNE6O95741 557 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 EIF2B2P49770 351 aaKnown RBP12.75□□□□□ -0.37
CTNS-201ENST00000046640 TMBIM6P55061 237 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 DNASE1L3Q13609 305 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 OR4F3Q6IEY1 312 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 CCDC149Q6ZUS6 474 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 LYSMD1Q96S90 227 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 RHNO1Q9BSD3 238 aa12.75□□□□□ -0.37
CTNS-201ENST00000046640 SACM1LQ9NTJ5 587 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms