RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 STX18Q9P2W9 335 aaKnown RBP15.94■□□□□ 0.14
PHGDH-216ENST00000641375 TMED5Q9Y3A6 229 aa15.94■□□□□ 0.14
PHGDH-216ENST00000641375 H0YIV9 168 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 EEDO75530 441 aaKnown RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 SLC35G4P0C7Q5 338 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 CASP2P42575 452 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 ZFP36L2P47974 494 aaKnown RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 FOXM1Q08050 763 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 CSTF3Q12996 717 aaKnown RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 BLMHQ13867 455 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 CEACAM7Q14002 265 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 DOC2AQ14183 400 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 CCDC85BQ15834 202 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 CHST15Q7LFX5 561 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 DENND6BQ8NEG7 585 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 OR5K2Q8NHB8 316 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 APOOQ9BUR5 198 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 SGPP1Q9BX95 441 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 TM7SF3Q9NS93 570 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 MAP10Q9P2G4 905 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 STOML1Q9UBI4 398 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 LEF1Q9UJU2 399 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 PCDHGA11Q9Y5H2 935 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 TCRBV21S2A2A0A5A6 115 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 E7ENX8 843 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 TRIM38O00635 465 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 NPPAP01160 153 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 HOXC4P09017 264 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 PNLIPRP1P54315 467 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 PPP2CBP62714 309 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 PPP2CAP67775 309 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 TAP2Q03519 686 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 TDGQ13569 410 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 E2F2Q14209 437 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 SMAD2Q15796 467 aaKnown RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 LAYNQ6UX15 382 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 TRIM69Q86WT6 500 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 APLFQ8IW19 511 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 MINDY1Q8N5J2 469 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 GLB1L3Q8NCI6 653 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 CMTM7Q96FZ5 175 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 ANKRD27Q96NW4 1050 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 ZBTB18Q99592 522 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 CCDC177Q9NQR7 707 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-216ENST00000641375 DYRK1BQ9Y463 629 aa15.93■□□□□ 0.14
PHGDH-216ENST00000641375 A6NHS1 94 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 LRRC72A6NJI9 287 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 SHISA7A6NL88 538 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 ENO4A6NNW6 628 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 C9JVG2 144 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 MAN2B1O00754 1011 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 ANKRD28O15084 1053 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 SLC31A1O15431 190 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 PI15O43692 258 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 CEACAM5P06731 702 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 ACPPP15309 386 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 CD22P20273 847 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 MAPK1P28482 360 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 HSD17B2P37059 387 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 TPMTP51580 245 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 NEK2P51955 445 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 ARHGAP19Q14CB8 494 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 KIAA0040Q15053 153 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 SAMD4BQ5PRF9 694 aaKnown RBP15.92■□□□□ 0.14
PHGDH-216ENST00000641375 WDR20Q8TBZ3 569 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 SETD7Q8WTS6 366 aaKnown RBP15.92■□□□□ 0.14
PHGDH-216ENST00000641375 BTBD1Q9H0C5 482 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 TMEM181Q9P2C4 612 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 PSMD13Q9UNM6 376 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 PRUNE2Q8WUY3 3088 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 KANSL1LA0AUZ9 987 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 HSD3B1P14060 373 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 NPPBP16860 134 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 HSD3B2P26439 372 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 IL12AP29459 219 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 FLOT2Q14254 428 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 HABP4Q5JVS0 413 aaKnown RBP15.92■□□□□ 0.14
PHGDH-216ENST00000641375 C10orf62Q5T681 223 aaPredicted RBP15.92■□□□□ 0.14
PHGDH-216ENST00000641375 LRRC56Q8IYG6 542 aaPredicted RBP15.92■□□□□ 0.14
PHGDH-216ENST00000641375 OR5AR1Q8NGP9 310 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 OR2T34Q8NGX1 318 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 NEIL2Q969S2 332 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 VPS33AQ96AX1 596 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 REPS1Q96D71 796 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 ZNF570Q96NI8 536 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 GPATCH1Q9BRR8 931 aaKnown RBP15.92■□□□□ 0.14
PHGDH-216ENST00000641375 TRIT1Q9H3H1 467 aaKnown RBP15.92■□□□□ 0.14
PHGDH-216ENST00000641375 EHD1Q9H4M9 534 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 ACTL8Q9H568 366 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 BRF2Q9HAW0 419 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 FZD3Q9NPG1 666 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 IRAK4Q9NWZ3 460 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 SUCOQ9UBS9 1254 aaKnown RBP15.92■□□□□ 0.14
PHGDH-216ENST00000641375 PACSIN3Q9UKS6 424 aa15.92■□□□□ 0.14
PHGDH-216ENST00000641375 ZNF839A8K0R7 811 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 PRPS2P11908 318 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 ACP5P13686 325 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 GABRG2P18507 467 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 CD72P21854 359 aa15.91■□□□□ 0.14
PHGDH-216ENST00000641375 SLC34A1Q06495 639 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms