RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 MC4RP32245 332 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 ACSL1P33121 698 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 DPP6P42658 865 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 MRPL19P49406 292 aaKnown RBP4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 ATXN1P54253 815 aaKnown RBP4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 FCGRTP55899 365 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 RBBP4Q09028 425 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 ST3GAL4Q11206 333 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 ZSWIM7Q19AV6 140 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 LRIT3Q3SXY7 679 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 ZDHHC20Q5W0Z9 365 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 STEAP3Q658P3 488 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 CES5AQ6NT32 575 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 PAMR1Q6UXH9 720 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 BAIAP2L2Q6UXY1 529 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 GPR149Q86SP6 731 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 ISCA2Q86U28 154 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 DTWD1Q8N5C7 304 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 TEX47Q8TBZ9 253 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 GRIN3AQ8TCU5 1115 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 DYNC2LI1Q8TCX1 351 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 NR4A3Q92570 626 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 TTC9Q92623 222 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 PGAP3Q96FM1 320 aaPredicted RBP4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 ZSWIM3Q96MP5 696 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 EPYCQ99645 322 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 PDCD10Q9BUL8 212 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 SLITRK2Q9H156 845 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 NMRK2Q9NPI5 230 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 PIGVQ9NUD9 493 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 HCN4Q9Y3Q4 1203 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 NOX1Q9Y5S8 564 aa4.9□□□□□ -1.62
HNRNPU-230ENST00000640657 SLC12A8A0AV02 714 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 ANKDD1BA6NHY2 528 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 E9PAM4 449 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 CLIC1O00299 241 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 NRP1O14786 923 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 FFAR3O14843 346 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 GPR182O15218 404 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 CAPN5O15484 640 aaPredicted RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 GPR42O15529 346 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 TSPAN1O60635 241 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 ENTPD6O75354 484 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 GADD45GO95257 159 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 SIX3O95343 332 aaPredicted RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 S1PR4O95977 384 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 HLA-DPB1P04440 258 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 CD247P20963 164 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 GSTM3P21266 225 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 PRKACGP22612 351 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 RPS3P23396 243 aaKnown RBP eCLIP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 OR3A3P47888 321 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 AP2S1P53680 142 aaPredicted RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 SRP54P61011 504 aaKnown RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 SH3BP2P78314 561 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 ZNF33BQ06732 778 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 PIGFQ07326 219 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 CAMK2GQ13555 558 aaPredicted RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 RAPSNQ13702 412 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 TMEM132BQ14DG7 1078 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 SHROOM1Q2M3G4 852 aaPredicted RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 COL28A1Q2UY09 1125 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 INAVAQ3KP66 663 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 DCST1Q5T197 706 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 ARMC12Q5T9G4 340 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 SIGIRRQ6IA17 410 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 MSANTD2Q6P1R3 559 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 DSG4Q86SJ6 1040 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 MON1AQ86VX9 555 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 LGI4Q8N135 537 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 C1orf52Q8N6N3 182 aaKnown RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 TRPM4Q8TD43 1214 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 FBXO32Q969P5 355 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 CMTM7Q96FZ5 175 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 MIOSQ9NXC5 875 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 RDH8Q9NYR8 311 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 MAP10Q9P2G4 905 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 ABCG2Q9UNQ0 655 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 EXOSC1Q9Y3B2 195 aaKnown RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 IGKV6D-21A0A0A0MT36 114 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 WASH4PA8MWX3 477 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 TLR4O00206 839 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 POLR1CO15160 346 aaPredicted RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 AKAP8O43823 692 aaKnown RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 OR10H3O60404 316 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 HLA-DQB2P05538 268 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 GSTM1P09488 218 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 TNNI3P19429 210 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 EFNA1P20827 205 aaPredicted RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 CPN2P22792 545 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 CA5AP35218 305 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 STC1P52823 247 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 PSMD4P55036 377 aaKnown RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 FOXD4Q12950 439 aaPredicted RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 DSC3Q14574 896 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 VMACQ2NL98 169 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 NDUFAF6Q330K2 333 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 CRTC2Q53ET0 693 aaPredicted RBP4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 GNASQ5JWF2 1037 aa4.9□□□□□ -1.63
HNRNPU-230ENST00000640657 PAQR3Q6TCH7 311 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms