RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 OTUB2Q96DC9 234 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 SLC35G5Q96KT7 338 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 SPRTNQ9H040 489 aaPredicted RBP17.14■□□□□ 0.33
SCARB2-223ENST00000640640 ZDHHC4Q9NPG8 344 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 ZNF624Q9P2J8 865 aaPredicted RBP17.14■□□□□ 0.33
SCARB2-223ENST00000640640 CCNB2O95067 398 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 SAGP10523 405 aaPredicted RBP17.14■□□□□ 0.33
SCARB2-223ENST00000640640 PTPN5P54829 565 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 SLC9A5Q14940 896 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 GPR65Q8IYL9 337 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 BORCS5Q969J3 196 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 ZNF570Q96NI8 536 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 SLCO3A1Q9UIG8 710 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 FZD4Q9ULV1 537 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 NDRG2Q9UN36 371 aaKnown RBP17.14■□□□□ 0.33
SCARB2-223ENST00000640640 MRPS7Q9Y2R9 242 aaKnown RBP17.14■□□□□ 0.33
SCARB2-223ENST00000640640 CHURC1-FNTBB4DL54 471 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 H3BNH8 94 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 K7ERQ8 282 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 DHRS4L1P0CG22 281 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 ATP4BP51164 291 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 APLP1P51693 650 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 ADGRG2Q8IZP9 1017 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 UBASH3BQ8TF42 649 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 C1GALT1C1Q96EU7 318 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 LEFTY1O75610 366 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 PTX3P26022 381 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-223ENST00000640640 PSMD7P51665 324 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 ABHD18Q0P651 414 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 ZNF846Q147U1 533 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 SNAP47Q5SQN1 464 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 MZT2AQ6P582 158 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 ERMP1Q7Z2K6 904 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 TSPEARQ8WU66 669 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 TMBIM1Q969X1 311 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 CALML5Q9NZT1 146 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 FAM86C2PA6NEL3 165 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 LRRC14BA6NHZ5 514 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 PLK4O00444 970 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 NME6O75414 186 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-223ENST00000640640 RHOP08100 348 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 CD247P20963 164 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 CLCN4P51793 760 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 GRSF1Q12849 480 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCARB2-223ENST00000640640 LRRC32Q14392 662 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 PDCD4Q53EL6 469 aaKnown RBP17.13■□□□□ 0.33
SCARB2-223ENST00000640640 SMPDL3AQ92484 453 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 SPHK2Q9NRA0 654 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 TAC3Q9UHF0 121 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 N6AMT1Q9Y5N5 214 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 RPL10P27635 214 aaKnown RBP17.13■□□□□ 0.33
SCARB2-223ENST00000640640 TMEM115Q12893 351 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-223ENST00000640640 AKAP7Q9P0M2 348 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-223ENST00000640640 DGKBQ9Y6T7 804 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 KLK1P06870 262 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 GRB7Q14451 532 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 ST13P5Q8NFI4 369 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-223ENST00000640640 ZNF347Q96SE7 839 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 SLC35A5Q9BS91 424 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 CSNK1G1Q9HCP0 422 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 TIMMDC1Q9NPL8 285 aa17.13■□□□□ 0.33
SCARB2-223ENST00000640640 ITPKBP27987 946 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 SFT2D3Q587I9 215 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 TMIGD1Q6UXZ0 262 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 COMMD2Q86X83 199 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 TTLQ8NG68 377 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 BIRC7Q96CA5 298 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 SIPA1Q96FS4 1042 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 RBM18Q96H35 190 aaKnown RBP17.12■□□□□ 0.33
SCARB2-223ENST00000640640 TMEM27Q9HBJ8 222 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 SLC25A12O75746 678 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 FDXRP22570 491 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 PSMA1P25786 263 aaKnown RBP17.12■□□□□ 0.33
SCARB2-223ENST00000640640 SP140Q13342 867 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 NDUFA9Q16795 377 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 SPRED3Q2MJR0 410 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 SAMD14Q8IZD0 417 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-223ENST00000640640 GJD3Q8N144 294 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 LRCH3Q96II8 777 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 MCCC1Q96RQ3 725 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-223ENST00000640640 TRMT61BQ9BVS5 477 aaKnown RBP17.12■□□□□ 0.33
SCARB2-223ENST00000640640 CLDN4O14493 209 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 ANXA8P13928 327 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 CPN2P22792 545 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 LGALS3BPQ08380 585 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 PTGR1Q14914 329 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 PLEKHS1Q5SXH7 462 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 P2RY8Q86VZ1 359 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 PNPLA1Q8N8W4 532 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 PTTG2Q9NZH5 202 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 SPATA7Q9P0W8 599 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 HEBP2Q9Y5Z4 205 aa17.12■□□□□ 0.33
SCARB2-223ENST00000640640 NPPAP01160 153 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 SCARB2Q14108 478 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 DUOXA1Q1HG43 343 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 NEK5Q6P3R8 708 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 ENPP7Q6UWV6 458 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 SYVN1Q86TM6 617 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 ISCA2Q86U28 154 aa17.11■□□□□ 0.33
SCARB2-223ENST00000640640 TRIM74Q86UV6 250 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms