RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 OTX2P32243 289 aa24.18■■□□□ 1.46
VEGFA-230ENST00000640482 GRM7Q14831 915 aa24.18■■□□□ 1.46
VEGFA-230ENST00000640482 SLC9A5Q14940 896 aa24.18■■□□□ 1.46
VEGFA-230ENST00000640482 ARHGAP19Q14CB8 494 aa24.18■■□□□ 1.46
VEGFA-230ENST00000640482 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.18■■□□□ 1.46
VEGFA-230ENST00000640482 TTLL10Q6ZVT0 673 aa24.18■■□□□ 1.46
VEGFA-230ENST00000640482 KCNMB4Q86W47 210 aa24.18■■□□□ 1.46
VEGFA-230ENST00000640482 OR2A1Q8NGT9 310 aa24.18■■□□□ 1.46
VEGFA-230ENST00000640482 FBXO5Q9UKT4 447 aa24.18■■□□□ 1.46
VEGFA-230ENST00000640482 A0A1B0GX78 115 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 A0A1W2PPV9 198 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 ZNF839A8K0R7 811 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 MYO1CO00159 1063 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 SRPX2O60687 465 aaPredicted RBP24.17■■□□□ 1.46
VEGFA-230ENST00000640482 F7P08709 466 aaPredicted RBP24.17■■□□□ 1.46
VEGFA-230ENST00000640482 ERGP11308 486 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 ENO3P13929 434 aaPredicted RBP24.17■■□□□ 1.46
VEGFA-230ENST00000640482 CMPK1P30085 196 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 HSD17B2P37059 387 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 GCGRP47871 477 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 ATP1A4Q13733 1029 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 FASTKQ14296 549 aaKnown RBP24.17■■□□□ 1.46
VEGFA-230ENST00000640482 HSP90AA5PQ58FG0 334 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 ZNF549Q6P9A3 640 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 OR2Y1Q8NGV0 311 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 SMPDL3AQ92484 453 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 ZNF285Q96NJ3 590 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 SLC30A3Q99726 388 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 ENAMQ9NRM1 1142 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 CUTCQ9NTM9 273 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 DHRS7Q9Y394 339 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 PCDHGB7Q9Y5F8 929 aa24.17■■□□□ 1.46
VEGFA-230ENST00000640482 DSCR3O14972 297 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 TTC4O95801 387 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 PDGFAP04085 211 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 RPA3P35244 121 aaPredicted RBP24.16■■□□□ 1.46
VEGFA-230ENST00000640482 CRYMQ14894 314 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 MRPL14Q6P1L8 145 aaKnown RBP24.16■■□□□ 1.46
VEGFA-230ENST00000640482 GIMAP7Q8NHV1 300 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 INPP5DQ92835 1189 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 FKBP10Q96AY3 582 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 RUNDC3BQ96NL0 473 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 NAT9Q9BTE0 207 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 MLXIPLQ9NP71 852 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 IARS2Q9NSE4 1012 aaKnown RBP24.16■■□□□ 1.46
VEGFA-230ENST00000640482 MED16Q9Y2X0 877 aa24.16■■□□□ 1.46
VEGFA-230ENST00000640482 SNRNP200O75643 2136 aaKnown RBP24.16■■□□□ 1.46
VEGFA-230ENST00000640482 USP27XA6NNY8 438 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 PEX12O00623 359 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 CTSVO60911 334 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 CEACAM4O75871 244 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 IGHEP01854 428 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 MPC1LP0DKB6 136 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 MCM3P25205 808 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 GNG11P61952 73 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 MPP1Q00013 466 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 DHX9Q08211 1270 aaKnown RBP24.15■■□□□ 1.46
VEGFA-230ENST00000640482 CUL1Q13616 776 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 FAM214AQ32MH5 1076 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 PAPD7Q5XG87 772 aaKnown RBP24.15■■□□□ 1.46
VEGFA-230ENST00000640482 SYDE1Q6ZW31 735 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-230ENST00000640482 MRGPREQ86SM8 312 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 FBXO15Q8NCQ5 510 aaPredicted RBP24.15■■□□□ 1.46
VEGFA-230ENST00000640482 PTERQ96BW5 349 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 FER1L6-AS2Q96M78 137 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 PKP4Q99569 1192 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 GPR21Q99679 349 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 EBNA1BP2Q99848 306 aaKnown RBP24.15■■□□□ 1.46
VEGFA-230ENST00000640482 AARSD1Q9BTE6 412 aaKnown RBP24.15■■□□□ 1.46
VEGFA-230ENST00000640482 ACAT2Q9BWD1 397 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 ANKMY1Q9P2S6 941 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 ZNF451Q9Y4E5 1061 aa24.15■■□□□ 1.46
VEGFA-230ENST00000640482 FITM1A5D6W6 292 aa24.14■■□□□ 1.45
VEGFA-230ENST00000640482 VPS26AO75436 327 aa24.14■■□□□ 1.45
VEGFA-230ENST00000640482 HAUS5O94927 633 aa24.14■■□□□ 1.45
VEGFA-230ENST00000640482 PNLIPRP1P54315 467 aa24.14■■□□□ 1.45
VEGFA-230ENST00000640482 VSX2P58304 361 aaPredicted RBP24.14■■□□□ 1.45
VEGFA-230ENST00000640482 TSTA3Q13630 321 aaPredicted RBP24.14■■□□□ 1.45
VEGFA-230ENST00000640482 COLEC12Q5KU26 742 aa24.14■■□□□ 1.45
VEGFA-230ENST00000640482 SPANXN3Q5MJ09 141 aa24.14■■□□□ 1.45
VEGFA-230ENST00000640482 SUSD1Q6UWL2 747 aa24.14■■□□□ 1.45
VEGFA-230ENST00000640482 RNF44Q7L0R7 432 aa24.14■■□□□ 1.45
VEGFA-230ENST00000640482 CAPZA3Q96KX2 299 aa24.14■■□□□ 1.45
VEGFA-230ENST00000640482 DPH7Q9BTV6 452 aa24.14■■□□□ 1.45
VEGFA-230ENST00000640482 MRPS30Q9NP92 439 aaKnown RBP24.14■■□□□ 1.45
VEGFA-230ENST00000640482 TENM4Q6N022 2769 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 A0A0J9YVX5 310 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 OR2A25A4D2G3 310 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 EIF3FO00303 357 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-230ENST00000640482 ZBTB14O43829 449 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 CNOT3O75175 753 aaKnown RBP24.13■■□□□ 1.45
VEGFA-230ENST00000640482 CCNDBP1O95273 360 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 ONECUT2O95948 504 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 ALBP02768 609 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 FOXK1P85037 733 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 WASHC2DQ5SRD0 308 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 UGT3A1Q6NUS8 523 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 C2CD4AQ8NCU7 369 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-230ENST00000640482 FDCSPQ8NFU4 85 aa24.13■■□□□ 1.45
VEGFA-230ENST00000640482 CD200R1Q8TD46 325 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms