RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 CCDC157Q569K6 752 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 LDLRAP1Q5SW96 308 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 LIN54Q6MZP7 749 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 FAM45BPQ6NSW5 357 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 MRPL14Q6P1L8 145 aaKnown RBP7.8□□□□□ -1.16
SCARB2-220ENST00000640076 KDM7AQ6ZMT4 941 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 MACC1Q6ZN28 852 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 C4orf33Q8N1A6 199 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 IL22RA1Q8N6P7 574 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 MFSD2AQ8NA29 543 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 FAM45AQ8TCE6 357 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 ACMSDQ8TDX5 336 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 NAT14Q8WUY8 206 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 RNF141Q8WVD5 230 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 FANCD2OSQ96PS1 177 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 LENG8Q96PV6 779 aaPredicted RBP7.8□□□□□ -1.16
SCARB2-220ENST00000640076 SMC6Q96SB8 1091 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 KCNJ15Q99712 375 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 GPATCH1Q9BRR8 931 aaKnown RBP7.8□□□□□ -1.16
SCARB2-220ENST00000640076 GPR174Q9BXC1 333 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 C6orf106Q9H6K1 298 aaPredicted RBP7.8□□□□□ -1.16
SCARB2-220ENST00000640076 FZD3Q9NPG1 666 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 EIF2B4Q9UI10 523 aaKnown RBP7.8□□□□□ -1.16
SCARB2-220ENST00000640076 LAMP5Q9UJQ1 280 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 VWA7Q9Y334 891 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 PRSS21Q9Y6M0 314 aa7.8□□□□□ -1.16
SCARB2-220ENST00000640076 AXIN1O15169 862 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 NIPSNAP2O75323 286 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 MTRF1O75570 445 aaKnown RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 RHOBTB1O94844 696 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 C2P06681 752 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 SLC35E2BP0CK96 405 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 RALBP11234 206 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 ATP1B2P14415 290 aaPredicted RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 BRAFP15056 766 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 FDXRP22570 491 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 CRABP2P29373 138 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 TRIM23P36406 574 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 SLC12A2P55011 1212 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 RAB10P61026 200 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 VAMP2P63027 116 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 SLC18A2Q05940 514 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 DMWDQ09019 674 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 ZNF648Q5T619 568 aaPredicted RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 KIAA0895LQ68EN5 471 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 PTRHD1Q6GMV3 140 aaKnown RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 TRIM74Q86UV6 250 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 PIM3Q86V86 326 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 BANPQ8N9N5 519 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 DRAXINQ8NBI3 349 aaPredicted RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 DENND6BQ8NEG7 585 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 HEXDCQ8WVB3 486 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 KCNJ9Q92806 393 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 RGMAQ96B86 450 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 BIRC7Q96CA5 298 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 TSPAN17Q96FV3 270 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 KLHDC7BQ96G42 594 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 DCUN1D1Q96GG9 259 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 COX14Q96I36 57 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 KCNC2Q96PR1 638 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 TEX101Q9BY14 249 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 PRMT8Q9NR22 394 aaPredicted RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 PCMTD2Q9NV79 361 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 MBD1Q9UIS9 605 aaPredicted RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 GNPTGQ9UJJ9 305 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 OAS3Q9Y6K5 1087 aaKnown RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 A0A096LPK6 155 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 IQCF5A8MTL0 148 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 H3BMM5 538 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 TYROBPO43914 113 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 SPAG7O75391 227 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 FSBPO95073 299 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 WISP3O95389 354 aaPredicted RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 HSPA4LO95757 839 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 MPOP05164 745 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 LPLP06858 475 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 NR1D1P20393 614 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 MSH3P20585 1137 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 CD9P21926 228 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 HNRNPA2B1P22626 353 aaKnown RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 GMPRP36959 345 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 CDK3Q00526 305 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 TMEM115Q12893 351 aaPredicted RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 GPR19Q15760 415 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 TSSK4Q6SA08 328 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 RAPH1Q70E73 1250 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 DET1Q7L5Y6 550 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 MTERF4Q7Z6M4 381 aaKnown RBP7.79□□□□□ -1.16
SCARB2-220ENST00000640076 SPNS2Q8IVW8 549 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 TMEM105Q8N8V8 129 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 RASGEF1AQ8N9B8 481 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 TSPEARQ8WU66 669 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 NACC2Q96BF6 587 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 FAM136AQ96C01 138 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 SGF29Q96ES7 293 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 MYOCQ99972 504 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 PCED1AQ9H1Q7 454 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 WDR26Q9H7D7 661 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 EBF2Q9HAK2 575 aa7.79□□□□□ -1.16
SCARB2-220ENST00000640076 POPDC3Q9HBV1 291 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms