RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 NUDT13Q86X67 352 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 MMD2Q8IY49 270 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 MIPOL1Q8TD10 442 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 APOBEC4Q8WW27 367 aaKnown RBP3.97□□□□□ -1.77
CCDC7-216ENST00000640058 NXNL1Q96CM4 212 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 CCDC3Q9BQI4 270 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 WNT5BQ9H1J7 359 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 CSNK1G3Q9Y6M4 447 aa3.97□□□□□ -1.77
CCDC7-216ENST00000640058 LOC100509620A0A075B734 347 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 IPO8O15397 1037 aaKnown RBP3.96□□□□□ -1.78
CCDC7-216ENST00000640058 TSPAN9O75954 239 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 MPZP25189 248 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 XGP55808 180 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 GEMIN4P57678 1058 aaKnown RBP3.96□□□□□ -1.78
CCDC7-216ENST00000640058 HNRNPKP61978 463 aaKnown RBP eCLIP3.96□□□□□ -1.78
CCDC7-216ENST00000640058 CSNK2BP67870 215 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 RIGQ13278 110 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 WTAPQ15007 396 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 ZNF74Q16587 644 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 C15orf59Q2T9L4 293 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-216ENST00000640058 PDLIM3Q53GG5 364 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-216ENST00000640058 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 UGT3A1Q6NUS8 523 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 CATSPERDQ86XM0 798 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 TAGAPQ8N103 731 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 THAP8Q8NA92 274 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 NUP37Q8NFH4 326 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 GATAD1Q8WUU5 269 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 SLAMF9Q96A28 289 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 SLC22A18Q96BI1 424 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 SPACA9Q96E40 222 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-216ENST00000640058 FAM49AQ9H0Q0 323 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-216ENST00000640058 GOLPH3LQ9H4A5 285 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 FAM120CQ9NX05 1096 aaKnown RBP3.96□□□□□ -1.78
CCDC7-216ENST00000640058 C19orf25Q9UFG5 118 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-216ENST00000640058 FBXO2Q9UK22 296 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-216ENST00000640058 TRIM17Q9Y577 477 aa3.96□□□□□ -1.78
CCDC7-216ENST00000640058 MPTX1A8MV57 137 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 PI4K2BG5E9Z4 385 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 SH3BP5O60239 455 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 MAPK12P53778 367 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 NAP1L1P55209 391 aaKnown RBP3.95□□□□□ -1.78
CCDC7-216ENST00000640058 PAX8Q06710 450 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 NTRK2Q16620 822 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 RILPL1Q5EBL4 403 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 CES4AQ5XG92 561 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 ITPRIPL1Q6GPH6 555 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 KIF6Q6ZMV9 814 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 NUP54Q7Z3B4 507 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 ERC1Q8IUD2 1116 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 RPAP2Q8IXW5 612 aaPredicted RBP3.95□□□□□ -1.78
CCDC7-216ENST00000640058 LGI2Q8N0V4 545 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 MINDY1Q8N5J2 469 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 C11orf45Q8TAV5 145 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 RASL10AQ92737 203 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 ZNF622Q969S3 477 aaKnown RBP eCLIP3.95□□□□□ -1.78
CCDC7-216ENST00000640058 JAKMIP2Q96AA8 810 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 PTERQ96BW5 349 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 ARSGQ96EG1 525 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 NKX3-1Q99801 234 aaPredicted RBP3.95□□□□□ -1.78
CCDC7-216ENST00000640058 TREX2Q9BQ50 279 aaPredicted RBP3.95□□□□□ -1.78
CCDC7-216ENST00000640058 TEX12Q9BXU0 123 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 TRIM6Q9C030 488 aaPredicted RBP3.95□□□□□ -1.78
CCDC7-216ENST00000640058 MED20Q9H944 212 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 STK26Q9P289 416 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 PCDHGB4Q9UN71 923 aa3.95□□□□□ -1.78
CCDC7-216ENST00000640058 SNURFLB1AK76 121 aa3.94□□□□□ -1.78
CCDC7-216ENST00000640058 IGHV3-13P01766 116 aa3.94□□□□□ -1.78
CCDC7-216ENST00000640058 VTNP04004 478 aa3.94□□□□□ -1.78
CCDC7-216ENST00000640058 TSFMP43897 325 aaKnown RBP3.94□□□□□ -1.78
CCDC7-216ENST00000640058 TMEM50BP56557 158 aa3.94□□□□□ -1.78
CCDC7-216ENST00000640058 SNAPC1Q16533 368 aa3.94□□□□□ -1.78
CCDC7-216ENST00000640058 AGAP4Q96P64 663 aa3.94□□□□□ -1.78
CCDC7-216ENST00000640058 SPAG5Q96R06 1193 aa3.94□□□□□ -1.78
CCDC7-216ENST00000640058 GIMAP4Q9NUV9 329 aa3.94□□□□□ -1.78
CCDC7-216ENST00000640058 TP53TG3Q9ULZ0 132 aa3.94□□□□□ -1.78
CCDC7-216ENST00000640058 R4GN57 208 aa3.94□□□□□ -1.78
CCDC7-216ENST00000640058 ARPC2O15144 300 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 WDHD1O75717 1129 aaPredicted RBP3.93□□□□□ -1.78
CCDC7-216ENST00000640058 EIF2DP41214 584 aaKnown RBP3.93□□□□□ -1.78
CCDC7-216ENST00000640058 EPS8Q12929 822 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 HSPB3Q12988 150 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 PEX6Q13608 980 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 EFTUD2Q15029 972 aaKnown RBP eCLIP3.93□□□□□ -1.78
CCDC7-216ENST00000640058 EXT1Q16394 746 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 MTHFSDQ2M296 383 aaKnown RBP3.93□□□□□ -1.78
CCDC7-216ENST00000640058 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 MFSD12Q6NUT3 480 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 KLHDC1Q8N7A1 406 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 SLC37A3Q8NCC5 494 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 OR10S1Q8NGN2 331 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 PRPF31Q8WWY3 499 aaKnown RBP3.93□□□□□ -1.78
CCDC7-216ENST00000640058 NSUN4Q96CB9 384 aaKnown RBP3.93□□□□□ -1.78
CCDC7-216ENST00000640058 TMCO6Q96DC7 493 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 RSRC1Q96IZ7 334 aaKnown RBP3.93□□□□□ -1.78
CCDC7-216ENST00000640058 SEPHS2Q99611 448 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 NYXQ9GZU5 481 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 TLE6Q9H808 572 aa3.93□□□□□ -1.78
CCDC7-216ENST00000640058 PANK3Q9H999 370 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms