RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ELP6Q0PNE2 266 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 ATP6AP1Q15904 470 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 CNPY1Q3B7I2 92 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 SPANXN4Q5MJ08 99 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 TMTC4Q5T4D3 741 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 NEK10Q6ZWH5 1172 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 SELENOMQ8WWX9 145 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 NUS1Q96E22 293 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 MSLNLQ96KJ4 702 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 NSMCE2Q96MF7 247 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 VPS35Q96QK1 796 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 P2RY13Q9BPV8 354 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 C8orf4Q9NR00 106 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 PADI4Q9UM07 663 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 SNX6Q9UNH7 406 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 DOCK9Q9BZ29 2069 aa14.67□□□□□ -0.06
TRIM3-215ENST00000639856 KCNE1BA0A087WTH5 132 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 PDLIM1O00151 329 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 DLGAP1O14490 977 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 DFNA5O60443 496 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 AP2A2O94973 939 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 BCKDHAP12694 445 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 MTHFRP42898 656 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 AP1S2P56377 157 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 APOFQ13790 326 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 PLA2G4EQ3MJ16 856 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 NEK5Q6P3R8 708 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 DSG4Q86SJ6 1040 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 NRSN1Q8IZ57 195 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 DTWD1Q8N5C7 304 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 ZNF513Q8N8E2 541 aaPredicted RBP14.66□□□□□ -0.06
TRIM3-215ENST00000639856 MCOLN3Q8TDD5 553 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 ASZ1Q8WWH4 475 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 ELMO1Q92556 727 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 TFAP2CQ92754 450 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 PYCR2Q96C36 320 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 PAPOLBQ9NRJ5 636 aaKnown RBP14.66□□□□□ -0.06
TRIM3-215ENST00000639856 OAZ3Q9UMX2 235 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 MTCH2Q9Y6C9 303 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 MYOCOSA0A1B0GUC4 107 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 C1QTNF3-AMACRE9PGA6 284 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 K7EQS6 105 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 TSPAN6O43657 245 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 FTH1P02794 183 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 TIE1P35590 1138 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 POLE2P56282 527 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 PLOD1Q02809 727 aaPredicted RBP14.66□□□□□ -0.06
TRIM3-215ENST00000639856 HTR4Q13639 388 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 LDLRAP1Q5SW96 308 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 PIP5KL1Q5T9C9 394 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 KRT80Q6KB66 452 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 CYP2U1Q7Z449 544 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 SPRED1Q7Z699 444 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 RAVER1Q8IY67 606 aaKnown RBP14.66□□□□□ -0.06
TRIM3-215ENST00000639856 AADATQ8N5Z0 425 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 LILRA3Q8N6C8 439 aaPredicted RBP14.66□□□□□ -0.06
TRIM3-215ENST00000639856 KRTCAP2Q8N6L1 136 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 L3MBTL4Q8NA19 623 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 ZNF583Q96ND8 569 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 ELOVL6Q9H5J4 265 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 SLC24A3Q9HC58 644 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 SLC22A14Q9Y267 594 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 TRIOBPQ9H2D6 2365 aa14.66□□□□□ -0.06
TRIM3-215ENST00000639856 RNF103-CHMP3A0A140T963 221 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 ACOX3O15254 700 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 MID1O15344 667 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 LZTS3O60299 673 aaPredicted RBP14.65□□□□□ -0.06
TRIM3-215ENST00000639856 SLCO2B1O94956 709 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 C7P10643 843 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 ATP6V1B1P15313 513 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 GGT1P19440 569 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 PRPH2P23942 346 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 DRD3P35462 400 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 RPS14P62263 151 aaKnown RBP14.65□□□□□ -0.06
TRIM3-215ENST00000639856 C2orf27AQ580R0 203 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 RAET1GQ6H3X3 334 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 RASGRP3Q8IV61 690 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 SMRP1Q8NCR6 262 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 SEPHS2Q99611 448 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 HDAC8Q9BY41 377 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 PNPLA3Q9NST1 481 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 DNAJC11Q9NVH1 559 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 SERGEFQ9UGK8 458 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 TRPM6Q9BX84 2022 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 QSOX1O00391 747 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 RASAL1O95294 804 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 H6PDO95479 791 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 LDLRP01130 860 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 PRPS2P11908 318 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 CDH1P12830 882 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 GSTT1P30711 240 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 CLDN8P56748 225 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 TMEM115Q12893 351 aaPredicted RBP14.65□□□□□ -0.06
TRIM3-215ENST00000639856 ENPP2Q13822 863 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 TMEM52BQ4KMG9 183 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 CHRDL2Q6WN34 429 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 MTSS1LQ765P7 747 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 GALNT15Q8N3T1 639 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 NCSTNQ92542 709 aa14.65□□□□□ -0.06
TRIM3-215ENST00000639856 RNF145Q96MT1 663 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms